DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp18a1 and PAD3

DIOPT Version :9

Sequence 1:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_189318.1 Gene:PAD3 / 822298 AraportID:AT3G26830 Length:490 Species:Arabidopsis thaliana


Alignment Length:498 Identity:129/498 - (25%)
Similarity:218/498 - (43%) Gaps:66/498 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LMVFLGLLALVTLLQWLVRNYRELR-KLPPGPWGLPVIGYLLFMGSEKHTR-------FMELAKQ 83
            :.|||..|.|:.|:...:...:..: ||||||..||:||.|       |.|       ...||:.
plant     1 MSVFLCFLVLLPLILIFLNVLKPSKYKLPPGPKKLPIIGNL-------HQRRTLHPRNRRNLAEM 58

  Fly    84 YGSLFSTRLGSQLTVVMSDYKMIRECFRRE--EFTGRPDTPFMQ-TLNGYGIINST--GKLWKDQ 143
            ||.:...:.|....|.:|..:...|..:..  |...||:...|: |...:..|...  |..|...
plant    59 YGPVALLQYGFVPVVAISSKEAAEEVLKINDLECCSRPEAAGMRATFYNFKDIGMAPFGDEWSLM 123

  Fly   144 RR------FLHDKLRQFGMTYMGNGKQQMQKRIMTEVHEFIGHLHASDGQPVDMSPVISVAVSNV 202
            |:      |...||:.|....     ::.....:.::.||     |:...||::...|...|.|:
plant   124 RKLSVVELFSVKKLQSFKYII-----EEENNLCVKKLSEF-----ATRQSPVNLERAIFTLVGNI 178

  Fly   203 ICSLMMSTR-FSIDDPKFRRFNFLIEEGMRLFGEIHTVDYIP-----TMQCFPSISTAKNKIAQN 261
            :|.:..... :..|..:..|...|:.:...:..|....|:.|     .:.|   ||....::..|
plant   179 VCRIGYGINLYECDFFEADRVVDLVLKAEAVIRETVFSDFFPGRIGRFIDC---ISGQNRRLKNN 240

  Fly   262 RAEMQRFYQDVIDDH-KRSFDPNNIRDLVDFYLCEIEKAKAEGTDAELFDGKNHEEQLVQVIIDL 325
            .:.:..|:|:|:::| |...:.:.|.||:      |:..|.:..|.:..  |...:.|..:|.|:
plant   241 FSVVDTFFQNVLNEHLKPGRESSTIVDLM------IDMKKKQENDGDAL--KFTTDHLKGMISDI 297

  Fly   326 FSAGMETIKTTLLWINVFMLRNPKEMRRVQDELDQVVG--RHRLPTIEDLQYLPITESTILESMR 388
            |.||:..:....||....::|||:.|::||||:...:|  :.|:.. |||..|...:..:.|::|
plant   298 FVAGIGGVAGITLWGMTELIRNPRVMKKVQDEIRTTLGDKKERIKE-EDLNQLHYFKLVVKETLR 361

  Fly   389 RSSIVPLATTHSPTRDVELNGYTIPAGSHVIPLINSVHMDPNLWEKPEEFRPSRFIDTEGKVRKP 453
            .....||.........:::.||.:||.:.::..:.::..||.|||..:||.|.||:|:....:..
plant   362 LHPTTPLLLPRQTMSHIKIQGYDVPAKTQILVNVYAMGRDPKLWENADEFNPDRFLDSSVDFKGK 426

  Fly   454 EY-FIPFGVGRRMC----LGDVLARMELFLFFASFMHCFDIAL 491
            .| |||||.|||:|    :|.:|..|.|.    :.::.||..|
plant   427 NYEFIPFGSGRRICPGMTMGTILVEMALL----NLLYFFDWGL 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp18a1NP_523403.2 p450 54..517 CDD:278495 121/470 (26%)
PAD3NP_189318.1 CYP71-like 59..474 CDD:410695 108/433 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100036
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.900

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