DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp18a1 and C4H

DIOPT Version :10

Sequence 1:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_180607.1 Gene:C4H / 817599 AraportID:AT2G30490 Length:505 Species:Arabidopsis thaliana


Alignment Length:157 Identity:28/157 - (17%)
Similarity:58/157 - (36%) Gaps:43/157 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 CRRVLRGDKAYLQSLT------GINRIPL---IENPFLNLTCSAIKNRIIPKSSQFKLL--MLNG 135
            |.....|.|..::.|:      .:|.|.:   :::|::.....|::   :| |..|.:|  :..|
plant   131 CTEKSSGLKLVVKILSSKDREMALNEIQVMNQLDHPYIIQMFDAVE---MP-SEIFLVLEYVEGG 191

  Fly   136 TAFARIVFADYEFIE-------KQV-------------QASYHPQNFFCFA--------VDANSS 172
            ..|.||:...|:.:|       :|:             .....|:|..|.:        :|...:
plant   192 MLFERIIDESYQLMEVDAMVFVRQICEGIFYMHQMYVLHLDLKPENIVCVSPTSHMVKIIDFGLA 256

  Fly   173 AEFQKRMKALERCLPNVFVLPVTESYD 199
            ..|:.:.|.......:.|:.|...::|
plant   257 RRFKPQNKLKVSFGTSEFLSPEVINFD 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp18a1NP_523403.2 CYP306A1-like 85..515 CDD:410745 27/154 (18%)
C4HNP_180607.1 PLN02394 3..505 CDD:215221 28/157 (18%)

Return to query results.
Submit another query.