DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp18a1 and Cyp2c24

DIOPT Version :9

Sequence 1:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001258283.1 Gene:Cyp2c24 / 499353 RGDID:1563697 Length:490 Species:Rattus norvegicus


Alignment Length:520 Identity:163/520 - (31%)
Similarity:263/520 - (50%) Gaps:66/520 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LLMVFLGLLALVTLLQWLVRNYRELRKLPPGPWGLPVIGYLLFMGSEKHTR-FMELAKQYGSLFS 89
            :|::.|.|..|:.|..|  |......||||||..||:||.:|.:..:..:: |...:|.||.:|:
  Rat     4 VLVLVLTLSCLLLLSLW--RQSSGRGKLPPGPTPLPIIGNILQIDVKDISKSFTNFSKIYGPVFT 66

  Fly    90 TRLGSQLTVVMSDYKMIRECF--RREEFTGRPDTPFMQTL-NGYGIINSTGKLWKDQRRFLHDKL 151
            ...|.:.|||:..|:.::|..  ..|||:||...|.::.: ||.|:|.|.|..||:.|.|....|
  Rat    67 LYFGPKPTVVVHGYEAVKEALDDLGEEFSGRGSFPIVERMNNGLGVIFSNGTKWKELRHFSLMTL 131

  Fly   152 RQFGMTYMGNGKQQMQKRIMTEVHEFIGHLHASDGQPVDMSPVISVAVSNVICSLMMSTRFSIDD 216
            |.|||     ||:.::.||..|....:..|..::|...|.:.::|.|.||||||::...||...|
  Rat   132 RNFGM-----GKRSIEDRIQEEASCLVEELRKTNGSLCDPTFILSCAPSNVICSVVFHNRFDYKD 191

  Fly   217 PKF--------RRFNFLIEEGMRLFGEIHT-VDYIPTMQCFPSISTAKNKIAQNRAEMQRFYQDV 272
            ..|        ..|..|....|::...:.. :||:|         .:.|::.:|.||::.:....
  Rat   192 ENFLNLMEKLNENFKILNSPWMQVCNALPAFIDYLP---------GSHNRVIKNFAEIKSYILRR 247

  Fly   273 IDDHKRSFDPNNIRDLVDFYLCEIEKAKAEGTDAELFDGKNHE-------EQLVQVIIDLFSAGM 330
            :.:|:.:.|.:|.||.:|.:|.::|:.|             |.       |.|:..:.|:|.||.
  Rat   248 VKEHQETLDMDNPRDFIDCFLIKMEQEK-------------HNPRTEFTIESLMATVSDVFVAGS 299

  Fly   331 ETIKTTLLWINVFMLRNPKEMRRVQDELDQVVGRHRLPTIEDLQYLPITESTILESMRRSSIVPL 395
            ||..|||.:..:.:|::.:...:||:|:|.|:||||.|.::|...:|.|::.:.|..|..:::|.
  Rat   300 ETTSTTLRYGLLLLLKHTEVTAKVQEEIDHVIGRHRRPCMQDRTRMPYTDAMVHEIQRYINLIPN 364

  Fly   396 ATTHSPTRDVELNGYTIPAGSHVIPLINSVHMDPNLWEKPEEFRPSRFIDTEGKVRKPEYFIPFG 460
            ...|:.|.:|....|.||.|:.::..:.||..|...:..||.|.|..|:|..|..:|.:||:||.
  Rat   365 NVPHAATCNVRFRNYVIPKGTDLVTSLTSVLHDDKEFPNPEVFDPGHFLDENGNFKKSDYFMPFS 429

  Fly   461 VGRRMCLGDVLARMELFLFFA---------SFMHCFDIALPEGQPLPSLKGNVGATITPESFKVC 516
            .|:|||:|:.||||||||...         ||:...||   :..|:.:..|.|     |.|:::|
  Rat   430 TGKRMCVGEALARMELFLLLTTIVQNFNLKSFVDTKDI---DTTPMANTFGRV-----PPSYQLC 486

  Fly   517  516
              Rat   487  486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp18a1NP_523403.2 p450 54..517 CDD:278495 154/492 (31%)
Cyp2c24NP_001258283.1 p450 30..487 CDD:278495 154/492 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BC78
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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