DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp18a1 and Cyp2c54

DIOPT Version :10

Sequence 1:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_996260.1 Gene:Cyp2c54 / 404195 MGIID:3642960 Length:490 Species:Mus musculus


Alignment Length:511 Identity:172/511 - (33%)
Similarity:265/511 - (51%) Gaps:48/511 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LLMVFLGLLALVTLLQWLVRNYRELRKLPPGPWGLPVIGYLLFMGSEKHTR-FMELAKQYGSLFS 89
            :|::.|.|..|..|..|  |...|..||||||..||:||.:|.:..:...: |..|::.||.:::
Mouse     4 ILVLVLTLSCLFLLSLW--RQSYERGKLPPGPTPLPIIGNILQIDVKDICQSFTNLSRVYGPVYT 66

  Fly    90 TRLGSQLTVVMSDYKMIRECF--RREEFTGRPDTP-FMQTLNGYGIINSTGKLWKDQRRFLHDKL 151
            ..||.:.|||:..|:.::|..  ..:.|.||...| |.:..||.||..|.|.:||:.|.|....|
Mouse    67 LYLGRKPTVVLHGYEAVKEALVDHGDVFAGRGRLPVFDKATNGMGIGFSNGSVWKNTRHFSLMTL 131

  Fly   152 RQFGMTYMGNGKQQMQKRIMTEVHEFIGHLHASDGQPVDMSPVISVAVSNVICSLMMSTRFSIDD 216
            |..||     ||:.::.|:..|....:..|..::|.|.|.:.::..|..|||||::...||   |
Mouse   132 RNLGM-----GKRSIEDRVQEEARCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQDRF---D 188

  Fly   217 PKFRRFNFLIEEGMRLFGEIHTVDYIPTMQ-C--FPSI----STAKNKIAQNRAEMQRFYQDVID 274
            .|.|.|..|:|:    ..||..:...|.:| |  ||::    ..:.|:..:|.|.::.|..:.|.
Mouse   189 YKDRDFLNLLEK----LDEISKILSTPWLQVCNTFPALLDYCPGSHNQFFKNYAYIKNFLLEKIR 249

  Fly   275 DHKRSFDPNNIRDLVDFYLCEIEKAKAEGTDAELFDGKNHEEQLVQVIIDLFSAGMETIKTTLLW 339
            :||.|.|....||.:|::|.   |...|..:..|   ||:.|.|...:.|||..|.|::.|||.:
Mouse   250 EHKESLDVTIPRDFIDYFLI---KGAQEDDNHPL---KNNFEHLAITVTDLFIGGTESMSTTLRY 308

  Fly   340 INVFMLRNPKEMRRVQDELDQVVGRHRLPTIEDLQYLPITESTILESMRRSSIVPLATTHSPTRD 404
            ..:.:|:.|....:||:|::.|:|:||.|.::|..::|.|.:.|.|..|...:||....|..|.|
Mouse   309 ALLLLLKYPHVTAKVQEEIEHVIGKHRRPCMQDRSHMPYTNAMIHEVQRFIDLVPNNLPHEVTCD 373

  Fly   405 VELNGYTIPAGSHVIPLINSVHMDPNLWEKPEEFRPSRFIDTEGKVRKPEYFIPFGVGRRMCLGD 469
            ::...|.||.|:.||..::||..|...:..||:|.|..|:|..||.:|.:||:||..|:|:|.|:
Mouse   374 IKFRNYFIPKGTTVITSLSSVLRDSKEFPNPEKFDPGHFLDENGKFKKSDYFMPFSTGKRICAGE 438

  Fly   470 VLARMELFLFFASFMHCFDIALPEGQPL---------PSLKGNVGATITPESFKVC 516
            .|||||||||..|.:..|::     :||         |.|   :|....|.:|::|
Mouse   439 GLARMELFLFLTSILQNFNL-----KPLVHPKDIDITPML---IGLGSVPPAFQLC 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp18a1NP_523403.2 CYP306A1-like 85..515 CDD:410745 149/448 (33%)
Cyp2c54NP_996260.1 CYP2C-like 61..485 CDD:410758 150/449 (33%)

Return to query results.
Submit another query.