DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp18a1 and Cyp2d12

DIOPT Version :9

Sequence 1:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_958748.1 Gene:Cyp2d12 / 380997 MGIID:88604 Length:504 Species:Mus musculus


Alignment Length:511 Identity:169/511 - (33%)
Similarity:269/511 - (52%) Gaps:39/511 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 MVFLGLLALVTLLQWLVRNYRELRKLPPGPWGLPVIGYLLFMG-SEKHTRFMELAKQYGSLFSTR 91
            ::|:.|:.|:...|.....|      ||||...||:|.||.:. :.......:|..:||.:||.:
Mouse    17 VIFILLVDLMHRRQSWTSCY------PPGPVPWPVLGNLLQVDLNNMPYSLYKLQNRYGDVFSLQ 75

  Fly    92 LGSQLTVVMSDYKMIRECFRR--EEFTGRPDTPFMQTL----NGYGIINST-GKLWKDQRRFLHD 149
            :..:..||::..|.::|....  |:...||..|..:.|    ...|:|.:. |..|::||||...
Mouse    76 MAWKPMVVINRMKAMKEVLLTCGEDTADRPPVPIFEHLGFKPRSQGMIFAPYGPEWREQRRFSLS 140

  Fly   150 KLRQFGMTYMGNGKQQMQKRIMTEVHEFIGHL----HASDGQPVDMSPVISVAVSNVICSLMMST 210
            .||.||:     |::.:::.::.|.    |||    ....||.::.:.::..|..|||.||:.:.
Mouse   141 SLRNFGL-----GRKSLEEWVIKEA----GHLCDAFTTQAGQYINPNTMLKKATCNVIASLIFAR 196

  Fly   211 RFSIDDPKFRRFNFLIEEGM-RLFGEI-HTVDYIPTMQCFPSISTAKNKIAQNRAEMQRFYQDVI 273
            ||..:||...|...::|:.: .|.|.| ..::..|.:...|.::   :|..|::........:::
Mouse   197 RFEYEDPYLIRMLKVLEDSLTELSGLIPEVINTFPILLHIPRLA---DKFLQSQKSFIAIVDNLL 258

  Fly   274 DDHKRSFDP-NNIRDLVDFYLCEIEKAKAEGTDAELFDGKNHEEQLVQVIIDLFSAGMETIKTTL 337
            .:::.::|| .:.|:|.|.:|.||||||  |.....|    ::|.|..|:||||:||:.|..|||
Mouse   259 TENRTTWDPAQSPRNLTDAFLAEIEKAK--GNPESSF----NDENLRMVVIDLFTAGILTTSTTL 317

  Fly   338 LWINVFMLRNPKEMRRVQDELDQVVGRHRLPTIEDLQYLPITESTILESMRRSSIVPLATTHSPT 402
            .|..:.|:.:|...||||.|:|:|:|:.|.|.:.|..::|.|.:.|.|..|...||||......:
Mouse   318 SWALLLMILHPDVQRRVQQEIDEVIGQVRHPEMADQAHMPYTNAVIHEVQRFGDIVPLHLPRITS 382

  Fly   403 RDVELNGYTIPAGSHVIPLINSVHMDPNLWEKPEEFRPSRFIDTEGKVRKPEYFIPFGVGRRMCL 467
            ||:|:..:.||.|:.::|.::|||||..:||||..|.|..|:|.:|...|.|.||.|..|||.||
Mouse   383 RDIEVQDFLIPKGTILLPNMSSVHMDDTVWEKPLRFHPEHFLDAQGHFVKHEAFITFSAGRRSCL 447

  Fly   468 GDVLARMELFLFFASFMHCFDIALPEGQPLPSLKGNVGATITPESFKVCLKRRPLG 523
            |:.||||||||||...:..|..::|:|||.||........:.|..:::|...|..|
Mouse   448 GEPLARMELFLFFTCLLQRFSFSVPDGQPQPSDHRVFSIMVAPSPYQLCAVIREQG 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp18a1NP_523403.2 p450 54..517 CDD:278495 161/477 (34%)
Cyp2d12NP_958748.1 p450 37..496 CDD:278495 161/476 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BC78
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43796
orthoMCL 1 0.900 - - OOG6_100036
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.720

Return to query results.
Submit another query.