DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp18a1 and Cyp2u1

DIOPT Version :9

Sequence 1:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001380742.1 Gene:Cyp2u1 / 310848 RGDID:1309433 Length:530 Species:Rattus norvegicus


Alignment Length:538 Identity:197/538 - (36%)
Similarity:293/538 - (54%) Gaps:43/538 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LRQLQVQQDGDAQHLLMV--FLGLLALVTLLQWLVRNYRELRKLPPGPWGLPVI---GYLL---- 67
            ||....:|.|...||..|  .|.|..|..||.|:....:....:||||...|::   ||||    
  Rat     7 LRPAAGEQPGVGPHLQAVGGALLLCGLAVLLDWVWLQRQRAGGIPPGPKPRPLVGNFGYLLLPRF 71

  Fly    68 -----FMGS-------EKHTRFMELAKQYGSLFSTRLGSQLTVVMSDYKMIRECF--RREEFTGR 118
                 ::||       .:|.....||:.||::||..:|.:|.||:||::.:||..  :.|.|:.|
  Rat    72 LRLHFWLGSGSQTDTVGRHVYLARLARVYGNIFSFFIGHRLVVVLSDFQSVREALVQQAEVFSDR 136

  Fly   119 PDTPFMQTL-NGYGIINS-TGKLWKDQRRFLHDKLRQFGMTYMGNGKQQMQKRIMTEVHEFIGHL 181
            |..|.:..| ...||:.: .|.:||.||||.|..||.||:     ||..::.||:.|.......:
  Rat   137 PRMPLISILTKEKGIVFAHYGPIWKQQRRFSHSTLRHFGL-----GKLSLEPRIIEEFAYVKAEM 196

  Fly   182 HASDGQPVDMSPVISVAVSNVICSLMMSTRFSIDDPKFRRFNFLIEEGMR--LFGEIHTVDYIPT 244
            ......|....||||.||||:||||....||...:.:|::....:..|:.  |..::..::..|.
  Rat   197 QKHGEAPFSPFPVISNAVSNIICSLCFGQRFDYTNKEFKKVLDFMSRGLEICLHSQLFLINLCPW 261

  Fly   245 MQCFPSISTAKNKIAQNRAEMQRFYQDVIDDHKRSFDPNNIRDLVDFYL--CEIEKAKAEGTDAE 307
            ....| ....| ::.|...::..|.:::|.:|:.|.|.||.:|.:|.||  .:.||.|.:||:  
  Rat   262 FYYLP-FGPFK-ELRQIERDITCFLKNIIKEHQESLDANNPQDFIDMYLLHTQEEKDKCKGTN-- 322

  Fly   308 LFDGKNHEEQLVQVIIDLFSAGMETIKTTLLWINVFMLRNPKEMRRVQDELDQVVGRHRLPTIED 372
             ||    |:.|..:|.|||.||.:|...:|||..::|..||...::|.:|:::|:||.|.|::.|
  Rat   323 -FD----EDYLFYIIGDLFIAGTDTTTNSLLWCLLYMSLNPGVQKKVHEEIERVIGRDRAPSLTD 382

  Fly   373 LQYLPITESTILESMRRSSIVPLATTHSPTRDVELNGYTIPAGSHVIPLINSVHMDPNLWEKPEE 437
            ...:|.||:||:|..|.|.:||||..|..:....|.||:||.|:.|:|.:.|:|.||.:||||::
  Rat   383 KAQMPYTEATIMEVQRLSMVVPLAIPHMTSEKTVLQGYSIPKGTVVLPNLWSIHRDPVIWEKPDD 447

  Fly   438 FRPSRFIDTEGKVRKPEYFIPFGVGRRMCLGDVLARMELFLFFASFMHCFDIALPEGQPLPSLKG 502
            |.|.||:|.:|::.|.|.|||||:|:|:|:|:.||:|||||.|.|.|..|..|||||...|.:.|
  Rat   448 FCPHRFLDDQGQLLKRETFIPFGIGKRVCMGEQLAKMELFLMFVSLMQSFTFALPEGSEKPIMTG 512

  Fly   503 NVGATITPESFKVCLKRR 520
            ..|.|:.|..|.|.:.:|
  Rat   513 RFGLTLAPHPFNVTVSKR 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp18a1NP_523403.2 p450 54..517 CDD:278495 183/489 (37%)
Cyp2u1NP_001380742.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 304 1.000 Domainoid score I1330
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H77704
Inparanoid 1 1.050 322 1.000 Inparanoid score I2426
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 1 1.000 - - otm45879
orthoMCL 1 0.900 - - OOG6_100036
Panther 1 1.100 - - O PTHR24300
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.970

Return to query results.
Submit another query.