DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp18a1 and Cyp4a3

DIOPT Version :10

Sequence 1:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster
Sequence 2:XP_038965516.1 Gene:Cyp4a3 / 298423 RGDID:631356 Length:511 Species:Rattus norvegicus


Alignment Length:519 Identity:117/519 - (22%)
Similarity:203/519 - (39%) Gaps:99/519 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LLMVFLGLLALVTLL---QWLVRNYRELRKLPPGP----WGLPVIGYLLFMGSEKHTRFME---- 79
            ||.:||.|...|...   |||:   :.|.|.|..|    ||..:          |...|.:    
  Rat    24 LLSLFLVLFKAVQFYLRRQWLL---KALEKFPSTPSHWLWGHDL----------KDREFQQVLTW 75

  Fly    80 LAKQYGSLFSTRLGSQLTVVMSDYKMIRECFRREEFTGRPD----------TPFMQTLNGYGIIN 134
            :.|..|:......||:..|::.|...::...      ||.|          .|::.:..|||::.
  Rat    76 VEKFPGACLQWLSGSKTRVLLYDPDYVKVVL------GRSDPKASGIYQFLAPWIVSGTGYGLLL 134

  Fly   135 STGKLWKDQRRFLHDKLRQFGMTYMGNGKQQMQKRIMTE-VHEFIGHLHASDGQ--PVDMSPVIS 196
            ..||.|     |.|.::......|   |..:...:||.: |...:......|.|  |:::...:|
  Rat   135 LNGKKW-----FQHWRMLTPAFHY---GILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVS 191

  Fly   197 VAVSNVICSLMMSTRFSID-DPKFRRFNFLIEEGMRL-FGEIHTVDY----IPTMQCFPSISTAK 255
            :...:.:.....|.:.|:. |...|.:...:|:...| |..:.:..|    |..|.....:|...
  Rat   192 LMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLTFFRVRSAFYGNSIIYNMSSDGRLSRRA 256

  Fly   256 NKIA---------------QNRAEMQRFYQDVIDDHKRSFDPNNIRDLVDFYLCEIEKAKAEGTD 305
            .:||               ||..|:|:..:      ||..|   ..|::.|              
  Rat   257 CQIAHEHTDGVIKMRKAQLQNEEELQKARK------KRHLD---FLDILLF-------------- 298

  Fly   306 AELFDGKNHEEQLVQVIIDLFS-AGMETIKTTLLWINVFMLRNPKEMRRVQDELDQVVGRHRLPT 369
            |::.|||:..::.::..:|.|. .|.:|..:.:.|:...:..:|:...|.::|:..::|.....|
  Rat   299 AKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVT 363

  Fly   370 IEDLQYLPITESTILESMRRSSIVPLATTHSPTRDVELNGYTIPAGSHVIPLINSVHMDPNLWEK 434
            .:.|..:..|...|.|::|....||..:....:.....:|.:||.|.....||..:|.:|:.|..
  Rat   364 WDHLDQISYTTMCIKEALRLYPPVPSVSRELSSPVTFPDGRSIPKGITTTILIYGLHHNPSYWPN 428

  Fly   435 PEEFRPSRFIDTEGKVRKPEYFIPFGVGRRMCLGDVLARMELFLFFASFMHCFDIALPEGQPLP 498
            |:.|.||||  :....|....::||..|.|.|:|...|..||.:..|..:..|:: ||:...:|
  Rat   429 PKVFDPSRF--SPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFEL-LPDPTRIP 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp18a1NP_523403.2 CYP306A1-like 85..515 CDD:410745 99/449 (22%)
Cyp4a3XP_038965516.1 CYP4B-like 69..506 CDD:410771 101/461 (22%)

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