DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp18a1 and cyp-34A1

DIOPT Version :10

Sequence 1:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_506787.1 Gene:cyp-34A1 / 188399 WormBaseID:WBGene00011698 Length:504 Species:Caenorhabditis elegans


Alignment Length:536 Identity:142/536 - (26%)
Similarity:246/536 - (45%) Gaps:86/536 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LLMVFLGLLALVTLLQWLVRNYRELRKLPPGPWGLPVIG------YLLFMGSEKHTRFMELAKQY 84
            |:::|..:::|....||..|     ::||.||:.||:||      |..:........:.|:.|.:
 Worm     3 LVLLFFTIISLALAHQWRAR-----KQLPRGPYPLPLIGNLHQLLYYCWKNGGLVEGYAEIQKSF 62

  Fly    85 GSLFSTRLGSQLTVVMSDYKMIRECF--RREEFTGRPDTPFMQTLNGY--GIINSTGKLWKDQRR 145
            |.:::..:|...||.::|:::..|..  |..|| |....|.:...|.|  |::.|.|:.:::..|
 Worm    63 GKVYTLWIGPLPTVFIADFEVAHETHVKRAHEF-GTRYAPGLMNYNRYERGVVASNGEFFQEHSR 126

  Fly   146 FLHDKLRQFGMTYMGNGKQQMQKRIMTEVHEFIGHLHASDG--------QPVDMSPVISVAVSNV 202
            |:....|.|     .:|:..|::|||.|.........:|:|        ......|...:...:|
 Worm   127 FVLSTFRNF-----ASGRNIMEERIMDEYRYRFEDFASSNGICNKERKIFETWARPFFDLLTGSV 186

  Fly   203 ICSLMMSTRFSIDDPKFRRFNFLIEEG------MRLFGEIHTVD----------------YIPTM 245
            |..::::.||..:||:|.:....:.:|      :.:|..:..::                ||   
 Worm   187 INKILINERFEQNDPEFEKLVSRLAKGFENTGFLDIFCPVRILESRFLKWRQDTIFEPFNYI--- 248

  Fly   246 QCFPSISTAKNKIAQNRAEMQRFYQDVIDDHKRSFDPNNIRDLVDFYLCEIEKAKAEGTDAELFD 310
                 :...|..||:..|:::      .|:|..|.||:   |.:|.||.:::|.|.||.:...  
 Worm   249 -----LELNKKSIARRVAQLK------ADEHVLSDDPD---DFLDAYLLKMQKDKNEGLETTF-- 297

  Fly   311 GKNHEEQLVQVIIDLFSAGMETIKTTLLWINVFMLRNPKEMRRVQDELDQVVGRHRLPTIEDLQY 375
               ..|.|...:.||:..|.||..|||.|....:|..|..:...::||.:|.|.||..::.|.:.
 Worm   298 ---TLENLAVDMYDLWLGGQETTSTTLNWACACLLNRPDVITTAREELIRVTGGHRSLSLIDRRE 359

  Fly   376 LPITESTILESMRRSSIVPLATTHSPTRDVELNGYTIPAGSHVIPLINSVHMDPNLWEKPEEFRP 440
            .|...:.|.|..|.:||:.:........|..::|..:.||:.|...|..:|:|.:|::...||||
 Worm   360 TPYLSAVISEVQRFASILNMNLFRIIKEDTVVDGQPLRAGTAVTAHIAMIHVDEDLFKNHTEFRP 424

  Fly   441 SRFIDTEGKVRKPEYFIPFGVGRRMCLGDVLARMELFLFFASFMHCFDIALPEGQPLPSLKGNVG 505
            .||::.:...:|   .||||:|||.|||:.||:.||:|...:.:..:|:. |.|: :|.||    
 Worm   425 ERFLENDDLDKK---LIPFGIGRRSCLGESLAKAELYLVLGNLLLDYDLE-PVGE-IPKLK---- 480

  Fly   506 ATITPESFKVCLKRRP 521
             |:.|...   ||:.|
 Worm   481 -TLAPFGL---LKQSP 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp18a1NP_523403.2 CYP306A1-like 85..515 CDD:410745 122/463 (26%)
cyp-34A1NP_506787.1 CYP1_2-like 63..456 CDD:410710 111/423 (26%)

Return to query results.
Submit another query.