DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp18a1 and cyp-35A4

DIOPT Version :9

Sequence 1:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_504124.1 Gene:cyp-35A4 / 183622 WormBaseID:WBGene00016786 Length:494 Species:Caenorhabditis elegans


Alignment Length:484 Identity:142/484 - (29%)
Similarity:232/484 - (47%) Gaps:60/484 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LLALVTLLQWL-VRNYRELRKLPPGPWGLPVIG-------YLLFMGSEKHTRFMEL-AKQYGSLF 88
            :|.:..:|.|| ||.|:::.:|||||..||:||       ||...||...|  ::| .|:||::|
 Worm     4 ILFISAILSWLIVRQYQKVSRLPPGPVSLPLIGNLPQIFYYLWTTGSIVST--LDLFRKRYGNIF 66

  Fly    89 STRLGSQLTVVMSDYKMIRECFRR--EEFTGRPDTPFMQTL-NGYGIINSTGKLWKDQRRFLHDK 150
            :..:|....|.::||::..|.|.:  .::..:...|.||.: ...||:.:.|..|:..|||....
 Worm    67 TLWVGPLPHVSIADYEISHEVFVKNGSKYADKFHAPVMQDIRKDMGIMVTNGDHWQHMRRFSLQT 131

  Fly   151 LRQFGMTYMGNGKQQMQKRIMTEVHEFIGHLHAS--DGQPV-DMSPVISVAVSNVICSLMMSTRF 212
            .|.     ||.||..|:.:||.|:......:..|  :|..| ..|....:.|.::|.|:::..||
 Worm   132 FRN-----MGVGKDIMETKIMQELDARCAEIDTSAMNGVTVTQASEFFELTVGSIINSILVGKRF 191

  Fly   213 SIDDPKFRRFNFLIEEGMRLFGEIHTVDYIPTM-----------QCFPSISTA--KNKIAQNRAE 264
              |......|..:||   .:...|.|..:...|           ..:.::|.|  .:|.......
 Worm   192 --DATTKHEFLKIIE---TMDASIETASFFDMMVPVWILKTFFKHRYDNLSDAFEVSKAFSAAEA 251

  Fly   265 MQRFYQDVIDDHKRSFDPNNIRDLVDFYLCEIEKAKAEGTDAELFDGKNHEEQLVQVIIDLFSAG 329
            ::|.  |.|...:...|.||::|..|.:|.:|||   ||...:.     :.|.|..:|.||:..|
 Worm   252 IKRV--DQIKSGRYFIDENNLQDYTDAFLLKIEK---EGQCQDF-----NMETLKTMIGDLWITG 306

  Fly   330 METIKTTLLWINVF--MLRNPKEMRRVQDELDQVV--GRHRLPTIEDLQYLPITESTILESMRRS 390
            .||..|||  |:.|  :|.:|:.|.:.::||.:|.  |...| ::.|....|...:.|.|..|.:
 Worm   307 QETTTTTL--ISGFNQLLLHPEVMVKAREELMKVTENGSRSL-SLTDRASTPYLNAMIGEIQRHA 368

  Fly   391 SIVPLATTHSPTRDVELNGYTIPAGSHVIPLINSVHMDPNLWEKPEEFRPSRFIDTEGKVRKPEY 455
            ||:.:...........:.|:.:.||:.|...:.::|::..::|.|.:|.|.|:|..|..::|   
 Worm   369 SILNVNFWKINKEFTYMGGHPVDAGALVTAQLGTLHVNETVFENPLKFDPERYIRDENLLQK--- 430

  Fly   456 FIPFGVGRRMCLGDVLARMELFLFFASFM 484
            .||||||:|.|||:.|||.||:|.|.:.:
 Worm   431 VIPFGVGKRSCLGESLARAELYLIFGNLL 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp18a1NP_523403.2 p450 54..517 CDD:278495 134/462 (29%)
cyp-35A4NP_504124.1 p450 26..465 CDD:299894 134/462 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BC78
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.