DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp18a1 and cyp-34A8

DIOPT Version :9

Sequence 1:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_504102.2 Gene:cyp-34A8 / 181850 WormBaseID:WBGene00015043 Length:499 Species:Caenorhabditis elegans


Alignment Length:520 Identity:153/520 - (29%)
Similarity:244/520 - (46%) Gaps:56/520 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LLMVFLGLLALVTLLQWLVRNYRELRKLPPGPWGLPVIG------YLLFMGSEKHTRFMELAKQY 84
            |:::.|.:.|::|...|..|     :|||.||..||:||      ||.:........|.||.|||
 Worm     3 LILILLAVAAVLTANLWRAR-----QKLPKGPTPLPLIGNFHQLFYLSWKTGSLVAAFNELKKQY 62

  Fly    85 GSLFSTRLGSQLTVVMSDYKMIRECF--RREEFTGRPDTPFMQTL-NGYGIINSTGKLWKDQRRF 146
            |.:|:..:|.:.:|.:.||.:..|..  |...|..|.....|:.: .|.|||.|.|..|.:.|||
 Worm    63 GKVFTVWMGPKPSVYICDYDIAHETHVKRANIFGTRYSVGGMEYIREGRGIIGSNGDFWLEHRRF 127

  Fly   147 LHDKLRQFGMTYMGNGKQQMQKRIMTEV-HEF--IGHLHASDGQ-PVDMSPVISVAVSNVICSLM 207
            ....||.||:     |:..|:.:||.|. :.|  ....|..:|. .|:.|.:..:.|.::|..|:
 Worm   128 ALMTLRNFGV-----GRTIMEDKIMDEYRYRFKDFKRTHFKNGAIQVNASSIFDLLVGSIINQLL 187

  Fly   208 MSTRFSIDDPKFRRFNFLIEEGMRLFGEIHTVDYIPTMQCFPSISTAKNKIA----------QNR 262
            :|.||..||.:|.:....:.|.:.....|.  .::|.......:...:.||.          .||
 Worm   188 VSERFEQDDQEFEKLKTSLAEALENISIIE--GFLPLWVLKSPLMKWRTKITFAPFDFIFELGNR 250

  Fly   263 AEMQRFYQDVIDDHKRSFDPNNIRDLVDFYLCEIEKAKAEGTDAELFDGKNHEEQLVQVIIDLFS 327
            ...:|........|..|.:.:   |.||.::.::||.|.||.|:..     ..|.|...:.||:.
 Worm   251 GIQRRVAAIENGTHTLSEEGD---DFVDAFIVKMEKDKKEGIDSSF-----TLETLAIDLFDLWQ 307

  Fly   328 AGMETIKTTLLWINVFMLRNPKEMRRVQDELDQVVGRHRLPTIEDLQYLPITESTILESMRRSSI 392
            ||.||..|||.|..|.:|.:|:.:.:::.||.:|.|..|..::.|....|...:.|.|..|.:||
 Worm   308 AGQETTSTTLTWACVCLLNHPEVVEKLRKELTEVTGGTRGVSLTDRTKTPYLNANINEFQRIASI 372

  Fly   393 VPLATTHSPTRDVELNGYTIPAGSHVIPLINSVHMDPNLWEKPEEFRPSRFIDTEGKVRKPEYFI 457
            :.:........|..::...:|||:.|...::.:|.|..:::.|:||||.||::.....::   .|
 Worm   373 LNVNLFRVLEEDTTIDSQPVPAGALVTTNLSMLHTDEEIFKNPQEFRPERFMENNNLEKR---LI 434

  Fly   458 PFGVGRRMCLGDVLARMELFLFFASFMHCFDIALPEGQPLPSLKGNVGATITPESFKVCLKRRPL 522
            |||:|:|.|.|:.|||.||||...:.:..:|:. |.| .||.::     |.||.:   .:||.|:
 Worm   435 PFGIGKRACPGESLARAELFLITGNMILDYDLE-PVG-TLPKIE-----TTTPFA---PMKRPPV 489

  Fly   523  522
             Worm   490  489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp18a1NP_523403.2 p450 54..517 CDD:278495 142/485 (29%)
cyp-34A8NP_504102.2 p450 26..494 CDD:278495 145/492 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BC78
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14091
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.