DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp18a1 and Cyp2c50

DIOPT Version :9

Sequence 1:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_598905.2 Gene:Cyp2c50 / 107141 MGIID:2147497 Length:490 Species:Mus musculus


Alignment Length:512 Identity:181/512 - (35%)
Similarity:274/512 - (53%) Gaps:51/512 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LLMVF-LGLLALVTLLQWLVRNYRELRKLPPGPWGLPVIGYLLFMGSEKHTR-FMELAKQYGSLF 88
            |::|| |..|.|::|  |  |...|..||||||..||:||.:|.:..:...: |..|:|.||.::
Mouse     5 LVLVFTLSCLFLLSL--W--RQSSERGKLPPGPTPLPIIGNILQINVKDICQSFTNLSKVYGPVY 65

  Fly    89 STRLGSQLTVVMSDYKMIRECF--RREEFTGRPDTP-FMQTLNGYGIINSTGKLWKDQRRFLHDK 150
            :..||.:.|||:..|:.::|..  ..|||.||...| |.:..||.|||.|.|.:||:.|||....
Mouse    66 TLYLGRKPTVVLHGYEAVKEALVDHGEEFAGRGRLPVFDKATNGMGIIFSKGNVWKNTRRFSLTT 130

  Fly   151 LRQFGMTYMGNGKQQMQKRIMTEVHEFIGHLHASDGQPVDMSPVISVAVSNVICSLMMSTRFSID 215
            ||..||     ||:.::.|:..|....:..|..::|.|.|.:.::..|..|||||::...||   
Mouse   131 LRNLGM-----GKRSIEDRVQEEARCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQDRF--- 187

  Fly   216 DPKFRRFNFLIEEGMRLFGEIHTVDYIPTMQ-C--FPSI----STAKNKIAQNRAEMQRFYQDVI 273
            |.|.|.|..|:|:    ..||..:...|.:| |  ||.:    ..:.||:.:|.|.::.|..:.|
Mouse   188 DYKDRDFLNLMEK----LNEITKIMSTPWLQVCNTFPVLLDYCPGSHNKVFKNYACIKNFLLEKI 248

  Fly   274 DDHKRSFDPNNIRDLVDFYLCEIEKAKAEGTDAELFDGKNHEEQLVQVIIDLFSAGMETIKTTLL 338
            .:|:.|.|....||.:|::|  |...:..|.    :..||..|.|...:.||||||.||..|||.
Mouse   249 KEHEESLDVTIPRDFIDYFL--INGGQENGN----YPLKNRLEHLAITVTDLFSAGTETTSTTLR 307

  Fly   339 WINVFMLRNPKEMRRVQDELDQVVGRHRLPTIEDLQYLPITESTILESMRRSSIVPLATTHSPTR 403
            :..:.:|:.|....:||:|::.|:|:||.|.::|..::|.|::.|.|..|...:||.:..|..|.
Mouse   308 YALLLLLKYPHVTAKVQEEIEHVIGKHRRPCMQDRSHMPYTDAMIHEVQRFIDLVPNSLPHEVTC 372

  Fly   404 DVELNGYTIPAGSHVIPLINSVHMDPNLWEKPEEFRPSRFIDTEGKVRKPEYFIPFGVGRRMCLG 468
            |::...|.||.|::||..::||..|...:..||:|.|..|:|..||.:|.:||:||..|:|:|.|
Mouse   373 DIKFRNYFIPKGTNVITSLSSVLRDSKEFPNPEKFDPGHFLDENGKFKKSDYFMPFSTGKRICAG 437

  Fly   469 DVLARMELFLFFASFMHCFDIALPEGQPL---------PSLKGNVGATITPESFKVC 516
            :.|||||||||..|.:..|::     :||         |.|   :|....|.:|::|
Mouse   438 EGLARMELFLFLTSILQNFNL-----KPLVHPKDIDVTPML---IGLASVPPAFQLC 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp18a1NP_523403.2 p450 54..517 CDD:278495 169/483 (35%)
Cyp2c50NP_598905.2 p450 30..487 CDD:278495 169/483 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BC78
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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