DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp18a1 and LOC100912642

DIOPT Version :10

Sequence 1:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster
Sequence 2:XP_008762180.2 Gene:LOC100912642 / 100912642 RGDID:6486125 Length:417 Species:Rattus norvegicus


Alignment Length:429 Identity:148/429 - (34%)
Similarity:233/429 - (54%) Gaps:28/429 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 TVVMSDYKMIRECFRR--EEFTGRPDTPFMQTL-NGYGIINSTGKLWKDQRRFLHDKLRQFGMTY 158
            :|::|...:|:|.|..  |.|..||..|..:.: |..|:|.|:|:.||:||||....||.||:  
  Rat     3 SVIISSLPLIKEAFSHLDENFINRPIFPLQKHIFNDNGLIFSSGQTWKEQRRFALMTLRNFGL-- 65

  Fly   159 MGNGKQQMQKRIMTEVHEFIGHLHASDGQPVDMSPVISVAVSNVICSLMMSTRFSIDDPKFRRFN 223
               ||:.:::||..|.|..:..:...:|||.|....|:.||||:|||:....||...|.:|:...
  Rat    66 ---GKKSLEQRIQEEAHHLVEAIGEEEGQPFDPHFKINNAVSNIICSITFGERFEYHDSQFQELL 127

  Fly   224 FLIEEGMRLFGEIHTVDYIPTMQCFPSISTAKNKIAQNR------AEMQRFYQDVIDDHKRSFDP 282
            .|:::.|.|    .|...|.....||.|  .|:...|::      .:::.:..|:|::|:..::|
  Rat   128 KLLDKAMYL----GTPMMIHLYNMFPWI--IKHLPGQHQTLLATWGKLKSYIADIIENHREDWNP 186

  Fly   283 NNIRDLVDFYLCEIEKAKAEGTDAELFDGKNHEEQLVQVIIDLFSAGMETIKTTLLWINVFMLRN 347
            ...||.:|.:|.|:.|...:.|.:      .:||.|:...:|||.||.||..|||.|..::|...
  Rat   187 AEPRDFIDAFLNEMAKYPDKTTTS------FNEENLICSTLDLFLAGTETTSTTLRWAVLYMALY 245

  Fly   348 PKEMRRVQDELDQVVGRHRLPTIEDLQYLPITESTILESMRRSSIVPLATTHSPTRDVELNGYTI 412
            |:...:||.|:|||:|:.:.|::.|...:|.|.:.:.|..|..:||||........|..|.|:.:
  Rat   246 PEVQEKVQAEIDQVIGQEKHPSLADRDSMPYTNAVVHEIQRMGNIVPLNVPREVAVDTTLAGFHL 310

  Fly   413 PAGSHVIPLINSVHMDPNLWEKPEEFRPSRFIDTEGKVRKPEYFIPFGVGRRMCLGDVLARMELF 477
            |.||.|:..:.::||||..|..|:.|.|..|:: .|:.:|.:.|:||.:|:|.|||:.|||.|||
  Rat   311 PKGSVVMTNLTALHMDPKEWATPDVFNPEHFLE-NGQFKKRDSFLPFSMGKRACLGEQLARSELF 374

  Fly   478 LFFASFMHCFDIALPEGQPLPSLKGNVGATITPESFKVC 516
            :||.:.|..|....|..:.| |||..:|.||:|.|.::|
  Rat   375 IFFTALMQKFTFKPPTNEKL-SLKFRLGITISPVSHRIC 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp18a1NP_523403.2 CYP306A1-like 85..515 CDD:410745 147/426 (35%)
LOC100912642XP_008762180.2 CYP2J 1..411 CDD:410755 147/426 (35%)

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