DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp18a1 and LOC100490015

DIOPT Version :9

Sequence 1:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster
Sequence 2:XP_002933610.1 Gene:LOC100490015 / 100490015 -ID:- Length:488 Species:Xenopus tropicalis


Alignment Length:498 Identity:169/498 - (33%)
Similarity:267/498 - (53%) Gaps:24/498 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LLMVFLGLLALVTLLQWLVRNYRELRKLPPGPWGLPVIGYLLFMGSEK-HTRFMELAKQYGSLFS 89
            |:.|.|.::....:.:.........:..||||..||:||....:..:| :..|||||::||.:||
 Frog     3 LVSVLLAVVICFFIFKVFYGGKNAFQNFPPGPKPLPIIGNFHMINMKKPYLTFMELAEKYGPVFS 67

  Fly    90 TRLGSQLTVVMSDYKMIRECF--RREEFTGRPDTP-FMQTLNGYGIINSTGKLWKDQRRFLHDKL 151
            .:||::..||:.....:::..  ..:||:|||..| |.:...|:|:..:.|:.||..|||....|
 Frog    68 IQLGTEKVVVLYGADAVKDALINHGDEFSGRPTIPVFDRISKGHGLFFANGENWKVMRRFTLSTL 132

  Fly   152 RQFGMTYMGNGKQQMQKRIMTEVHEFIGHLHASDGQPVDMSPVISVAVSNVICSLMMSTRFSIDD 216
            |.|||     ||:.::.||..|....:....:..|:|.|.:.:::.||:|:|..::::.||...|
 Frog   133 RDFGM-----GKKTIEDRICEESDFLMETFKSYKGKPFDNTMIMNAAVANIIVHILLNHRFDYQD 192

  Fly   217 PKFRRFNFLIEEGMRLFGEIHTVDY--IPT-MQCFPSISTAKNKIAQNRAEMQRFYQDVIDDHKR 278
            |...:....|.|.:|:.|:...|.|  .|: ||.||.|   ...:|::..:...|.::....|:.
 Frog   193 PTLLKLINTISENVRIAGKPMVVLYNAYPSIMQWFPGI---HKSVAESILQFYDFLRETFTQHRD 254

  Fly   279 SFDPNNIRDLVDFYLCEIEKAKAEGTDAELFDGKNHEEQLVQVIIDLFSAGMETIKTTLLWINVF 343
            ..|.|:.|||:|.:|.:.::.|:..|  :.|:..|    |..::.|||.|||||..|||.|..:|
 Frog   255 QLDVNDQRDLIDVFLVKQQEEKSSST--KFFNDHN----LTALVADLFGAGMETTSTTLRWGLLF 313

  Fly   344 MLRNPKEMRRVQDELDQVVGRHRLPTIEDLQYLPITESTILESMRRSSIVPLATTHSPTRDVELN 408
            |::.|...::||||:|:|:|..: |.:|..:.:|.|::.|.|..|..::.|. ..|..|.||...
 Frog   314 MMKYPDIQKKVQDEIDRVIGSAQ-PRLEHRKTMPYTDAVIHEIQRLGNLAPF-IGHETTTDVTFR 376

  Fly   409 GYTIPAGSHVIPLINSVHMDPNLWEKPEEFRPSRFIDTEGKVRKPEYFIPFGVGRRMCLGDVLAR 473
            ||.||.|:..|.|:.||..|.:.::|||||.|..|:|:||...|.|.|:||..|||||:|:.||:
 Frog   377 GYFIPKGTQAIVLLASVLQDKDYFKKPEEFYPEHFLDSEGNFVKNEAFLPFSAGRRMCVGETLAK 441

  Fly   474 MELFLFFASFMHCFDIALPEGQPLPSLKGNVGATITPESFKVC 516
            |||||||...:..|....|.|..:....|: ..|..|...::|
 Frog   442 MELFLFFTKLLQNFTFQPPPGVEVDLTCGD-AVTSKPLDHQIC 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp18a1NP_523403.2 p450 54..517 CDD:278495 166/470 (35%)
LOC100490015XP_002933610.1 p450 31..483 CDD:365848 165/468 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.