DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp18a1 and cyp2a6.2

DIOPT Version :9

Sequence 1:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001106451.1 Gene:cyp2a6.2 / 100127628 XenbaseID:XB-GENE-5892300 Length:494 Species:Xenopus tropicalis


Alignment Length:501 Identity:155/501 - (30%)
Similarity:264/501 - (52%) Gaps:39/501 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LALVTLLQWLVRNY---RELRK--LPPGPWGLPVIGYLLFMGSEKHTR-FMELAKQYGSLFSTRL 92
            |.|..::.:||.::   |:|||  :||||...|::|.:|.:.:::..: .::|:::||::|:..|
 Frog     9 LILAVIVSFLVYSFTWRRKLRKINMPPGPPLYPLLGNMLQISAKEFPQSLVKLSEKYGTVFTVYL 73

  Fly    93 GSQLTVVMSDYKMIRECF--RREEFTGRPDTPFMQTL-NGYGIINSTGKLWKDQRRFLHDKLRQF 154
            .|:..|::|.|..|:|..  ..|.|..|.::|....| ..||:|.|.|:.||..|||....||.|
 Frog    74 PSKPAVILSGYDCIKEALLDNNESFGARGESPLGYLLFKDYGVIFSNGERWKQLRRFSLSCLRDF 138

  Fly   155 GMTYMGNGKQQMQKRIMTEVHEFIGHLHASDGQPVDMSPVISVAVSNVICSLMMSTRFSIDDPKF 219
            ||     ||:.:::||..|....:..|..:...|:|.:.::::|||||||:::...||...|.||
 Frog   139 GM-----GKKSIEERIQEEARCLVEELGKNGDTPMDPTYMLTLAVSNVICTVVFGERFDYKDEKF 198

  Fly   220 RRFNFLIEEGMRLFGEIHTVDYIPTMQCFPS----ISTAKNKIAQNRAEMQRFYQDVIDDHKRSF 280
            .....|::...|.|.....:    .:..||:    :.....::.:|..:::.|..:.:..|:.:.
 Frog   199 MTLISLLKIVSRDFSSAWGI----LLNLFPNTLSRLPGPPQRLFRNFDKLKAFVAESLKSHQETL 259

  Fly   281 DPNNIRDLVDFYLCEIEKAKAEGTDAELFDGKNHEEQLVQVIIDLFSAGMETIKTTLLWINVFML 345
            :.:..||.:|.:|.::||.| .....|.     |.:.|...::|||.||.||...||.:..:.:|
 Frog   260 NSDCPRDFIDCFLIKMEKEK-NNPQTEF-----HSDNLFGTVLDLFFAGTETTSITLKYSFLMLL 318

  Fly   346 RNPKEMRRVQDELDQVVGRHRLPTIEDLQYLPITESTILESMRRSSIVPLATTHSPTRDVELNGY 410
            :..:..|:..:|:|.::|:.|.|..||...:|.|.:.|.|..|.:.||||...|:.|.|:...||
 Frog   319 KYTEVTRKAMEEIDNIIGQERCPFYEDRIKMPYTNAVIHEIQRMADIVPLGVPHATTHDIIFRGY 383

  Fly   411 TIPAGSHVIPLINSVHMDPNLWEKPEEFRPSRFIDTEGKVRKPEYFIPFGVGRRMCLGDVLARME 475
            .||..:.:.||:.||..||..:..|::|.|:.|:|..|..:|.:.|.||.:|:|.|||:.|||||
 Frog   384 NIPKDTIIFPLMTSVLKDPKYFNDPKQFDPAHFLDENGSFKKNDAFQPFSIGKRSCLGEGLARME 448

  Fly   476 LFLFFASFMHCFDI---ALPEG---QPLPSLKGNVGATITPESFKV 515
            :|||..|.:..|::   ..|:.   .|.|...|.:     |.::|:
 Frog   449 IFLFITSILQAFNLKSDTAPQDIDITPEPDKNGAI-----PRTYKM 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp18a1NP_523403.2 p450 54..517 CDD:278495 147/476 (31%)
cyp2a6.2NP_001106451.1 p450 45..475 CDD:365848 136/444 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 291 1.000 Domainoid score I1509
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 302 1.000 Inparanoid score I2625
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 1 1.000 - - otm48967
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.050

Return to query results.
Submit another query.