DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and CYP89A6

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_176674.1 Gene:CYP89A6 / 842802 AraportID:AT1G64940 Length:511 Species:Arabidopsis thaliana


Alignment Length:577 Identity:143/577 - (24%)
Similarity:228/577 - (39%) Gaps:114/577 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLVPGALVLVIL--YLCERQCNDLMGAP-PPGPWGLPFLGYLPFLD---------ARAPHKSLQK 75
            ||:.|:|.|.:|  :|..|:.:.....| ||.|...||:|.|.:|.         .|:.|..|  
plant     5 LLILGSLFLSLLVNHLLFRRRDSFSSLPLPPDPNFFPFIGTLKWLRKGLGGLDNYLRSVHHHL-- 67

  Fly    76 LAKRYGGIFELKMGRVPTVVLSDAALVRD--FFRRDVMTGRAPLYL--------THGIMGGFGII 130
                 |.|..|::...|.:.::|.:|...  .....|...|.|...        .|.|..     
plant    68 -----GPIITLRITSRPAIFVTDRSLAHQALVLNGAVFADRPPAESISKIISSNQHNISS----- 122

  Fly   131 CAQEDIWRHARRE-TIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPL 194
            |.....||..||. |.:.|       .|..||:....|  |.|.|.  ||....|......:..:
plant   123 CLYGATWRLLRRNLTSEIL-------HPSRLRSYSHAR--RWVLEI--LFGRFGKNRGEEPIVVV 176

  Fly   195 PALHHSLGNIINDLVFGITYKRDDPDWL---YLQRLQEEGVKLIGVS--GVVNFLPWLRHLPANV 254
            ..||:::..::..:.||  .|.|:....   |:||.|     |:|.|  .::...|         
plant   177 DHLHYAMFALLVLMCFG--DKLDEKQIKQVEYVQRRQ-----LLGFSRFNILTLWP--------- 225

  Fly   255 RNIRFLLEGKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQE- 318
               :|       |..||.:..|...|...|:|.|...|...:|  :.:::.:.|.|:|...::| 
plant   226 ---KF-------TKLIYRKRWEEFFQMQSEQQDVLLPLIRARR--KIVDERKKRSSEEEKDNKEY 278

  Fly   319 -QSEADE--DDEESDEEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLR 380
             ||..|.  |.|..||:....                    :|::..|.::...||.||:...|:
plant   279 VQSYVDTLLDVELPDEKRKLN--------------------EDEIVSLCSEFLNAGTDTTATALQ 323

  Fly   381 WFLLYLAREQRCQRRLHELLLPLGPSPTLE----ELEPLAYLRACISETMRIRSVVPLGIPHGCK 441
            |.:..|.:....||||:|.:..:......|    :.:.:.||:|.:.|.:|........:||...
plant   324 WIMANLVKNPEIQRRLYEEIKSIVGEEAKEVEEQDAQKMPYLKAVVMEGLRRHPPGHFVLPHSVT 388

  Fly   442 ENFVVGDYFI--KGGSMIVCSEWAIHMDPVAFPEPEEFRPERFL--TADGAYQAPPQFIPFSSGY 502
            |:.|:|.|.:  ||....:.:|  |..||..:.||..|:||||:  ..|.......:.:||.:|.
plant   389 EDTVLGGYKVPKKGTINFMVAE--IGRDPKVWEEPMAFKPERFMEEAVDITGSRGIKMMPFGAGR 451

  Fly   503 RMCPGEEMARMILTLFTGRILRRFHLELPSGTEVDMAGESGITLTPTPHMLRFTKLP 559
            |:|||..:|.:.|..:...::|.|..:...|.|||:..:...|:. ..|.|:...:|
plant   452 RICPGIGLAMLHLEYYVANMVREFEWQEVQGHEVDLTEKLEFTVV-MKHPLKALAVP 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 133/542 (25%)
CYP89A6NP_176674.1 CYP77_89 68..502 CDD:410698 121/500 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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