DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2c23

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_114027.2 Gene:Cyp2c23 / 83790 RGDID:620370 Length:494 Species:Rattus norvegicus


Alignment Length:531 Identity:146/531 - (27%)
Similarity:233/531 - (43%) Gaps:95/531 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 GAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIFELKMGRVPTVVLSDAALVRDFF--RR 108
            |..||||..||.:|.|..|:.:....||.||||.||.::.|..|..|||||....:|::..  :.
  Rat    31 GRLPPGPTPLPIIGNLLQLNLKDIPASLSKLAKEYGPVYTLYFGTSPTVVLHGYDVVKEALLQQG 95

  Fly   109 DVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDWLKALGMTRRPGELRARLERRIARGVD 173
            |...||.||.:......|:|:|.:..:.|:..||.::..|:..||.:|      .||.|    |.
  Rat    96 DEFLGRGPLPIIEDTHKGYGLIFSNGERWKVMRRFSLMTLRNFGMGKR------SLEER----VQ 150

  Fly   174 ECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGITYKRDDPDWLYLQRLQEEGVKLIGVS 238
            |..|....|.:|:.|...:|...|..:..|:|..::|...::.::..:|.|..|..:..:.:...
  Rat   151 EEARCLVEELQKTKAQPFDPTFILACAPCNVICSILFNDRFQYNNKTFLNLMDLLNKNFQQVNSV 215

  Fly   239 GVVNFLPW---LRHLPA----------NVRNIRFLLEGKAKTHAIYDRIVEACGQRLKEKQKVFK 290
            ....:..|   :::||.          :|:|  |:|| |.|.|                      
  Rat   216 WCQMYNLWPTIIKYLPGKHIEFAKRIDDVKN--FILE-KVKEH---------------------- 255

  Fly   291 ELQEQKRLQRQLEKEQLRQSKEADPSQEQSEAD---EDDEESDEEDTYEPECILEHFLAVRDTDS 352
                               .|..||:..:...|   ...||  |:|..:.|..||: |||     
  Rat   256 -------------------QKSLDPANPRDYIDCFLSKIEE--EKDNLKSEFHLEN-LAV----- 293

  Fly   353 QLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLHELL---LPLGPSPTLEELEP 414
               |.       ::||.||.:|:..|||:.||.|.:....|.::||.|   :.....|::::...
  Rat   294 ---CG-------SNLFTAGTETTSTTLRFGLLLLMKYPEVQAKVHEELDRVIGRHQPPSMKDKMK 348

  Fly   415 LAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDPVAFPEPEEFRP 479
            |.|..|.:.|..|..:::|..:||...::....||.|..|:.::....::.:|...|..||:|.|
  Rat   349 LPYTDAVLHEIQRYITLLPSSLPHAVVQDTKFRDYVIPKGTTVLPMLSSVMLDQKEFANPEKFDP 413

  Fly   480 ERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLE-LPSGTEVDMAG-ES 542
            ..||..:|.::....|:|||.|.|.|.||.:|||.|.||...:|::|.|: |....::|:.. .:
  Rat   414 GHFLDKNGCFKKTDYFVPFSLGKRACVGESLARMELFLFFTTLLQKFSLKTLVEPKDLDIKPITT 478

  Fly   543 GITLTPTPHML 553
            ||...|.|:.|
  Rat   479 GIINLPPPYKL 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 145/528 (27%)
Cyp2c23NP_114027.2 p450 34..491 CDD:278495 145/528 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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