DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and TT7

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_196416.1 Gene:TT7 / 830693 AraportID:AT5G07990 Length:513 Species:Arabidopsis thaliana


Alignment Length:594 Identity:144/594 - (24%)
Similarity:224/594 - (37%) Gaps:157/594 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIF 84
            |:|||.. .|.|::.....|:........||||...|.:|.||.:..: ||::|..:...||.|.
plant     6 LTILLAT-VLFLILRIFSHRRNRSHNNRLPPGPNPWPIIGNLPHMGTK-PHRTLSAMVTTYGPIL 68

  Fly    85 ELKMGRVPTVVLSDAALVRDFFR-RDV-MTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDW 147
            .|::|.|..||.:..::...|.: .|. ...|.|   ..|.              :|......|.
plant    69 HLRLGFVDVVVAASKSVAEQFLKIHDANFASRPP---NSGA--------------KHMAYNYQDL 116

  Fly   148 LKALGMTRRPGELRARLERRIARGVDECVRLFDTEA----KKSCASEVNPL----------PALH 198
            :.|      |...|.||.|:|:     .|.||..:|    |.....||..|          |.  
plant   117 VFA------PYGHRWRLLRKIS-----SVHLFSAKALEDFKHVRQEEVGTLTRELVRVGTKPV-- 168

  Fly   199 HSLGNIINDLV-------------FG--ITYKRDDPDWLYLQRLQEEGVKLIGVSGVVNFLP--- 245
             :||.::|..|             ||  ..:|.|:     .:.:..|.:.|.||..:.:|:|   
plant   169 -NLGQLVNMCVVNALGREMIGRRLFGADADHKADE-----FRSMVTEMMALAGVFNIGDFVPSLD 227

  Fly   246 WLRHLPANVRNIRFLLEGKA----KTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQ 306
            ||.            |:|.|    :.|..:|..:.:.   |||.:.                   
plant   228 WLD------------LQGVAGKMKRLHKRFDAFLSSI---LKEHEM------------------- 258

  Fly   307 LRQSKEADPSQEQSEADEDDEESDEEDTYEPECILEHFLAVR----DTDSQLYCDDQLRHLLADL 367
                    ..|:|...|                :|...::::    |.|.....|.:::.||.::
plant   259 --------NGQDQKHTD----------------MLSTLISLKGTDLDGDGGSLTDTEIKALLLNM 299

  Fly   368 FGAGVDTSLATLRWFLLYLAREQRCQ-RRLHELLLPLGPSPTLEE--LEPLAYLRACISETMRIR 429
            |.||.|||.:|:.|.:..|.|..... :...||.:.:|....:.|  :..|.||:|.|.|..|:.
plant   300 FTAGTDTSASTVDWAIAELIRHPDIMVKAQEELDIVVGRDRPVNESDIAQLPYLQAVIKENFRLH 364

  Fly   430 SVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTA---DGAYQA 491
            ...||.:||...|:..:..|.|..||.::.:.|||..||..:.:|..|:|||||..   .|....
plant   365 PPTPLSLPHIASESCEINGYHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVK 429

  Fly   492 PPQF--IPFSSGYRMCPGEEMARMILTLFTGRILRRFHLELPSGT---EVDMAGESGITLT---- 547
            ...|  |||.:|.|:|.|..:....:...|..:::.|..||..|.   :::|....|:||.    
plant   430 GSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTPEKLNMEESYGLTLQRAVP 494

  Fly   548 ----PTPHM 552
                |.|.:
plant   495 LVVHPKPRL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 137/565 (24%)
TT7NP_196416.1 PLN02687 2..511 CDD:215371 144/594 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1305
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 157 1.000 Inparanoid score I1659
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.050

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