DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment phm and CYP84A4

DIOPT Version :9

Sequence 1:	NP_001285414.1	Gene:	phm / 32857	FlyBaseID:	FBgn0004959	Length:	574	Species:	Drosophila melanogaster
Sequence 2:	NP_196053.2	Gene:	CYP84A4 / 830312	AraportID:	AT5G04330	Length:	512	Species:	Arabidopsis thaliana

Alignment Length:	573	Identity:	155/573 - (27%)
Similarity:	237/573 - (41%)	Gaps:	115/573 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    22 ILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIFEL 86
            |:|||..|.|....|..||.  |:...||||.|||.:|.:..:: :..|:.|.||::.|||:..|
plant     8 IVLVPLLLFLFPHLLLRRQM--LLKPYPPGPKGLPVIGNILMMN-QFNHRGLAKLSRIYGGLLHL 69

  Fly    87 KMGRVPTVVLSDAALVRDFFR-RDVMTGRAPL-----YLTHGIMGGFGIICAQEDIWRHARRETI 145
            ::|.....|:|...:.|...: :|.:....|.     |||:|  |.....|.....||..|:..:
plant    70 RLGFSHIFVVSSPDIARQVLQVQDHVFSNRPTTIAIRYLTYG--GSDLAFCNYGPFWRRMRKLYV 132

  Fly   146 DWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKS---CASEV-NPLP--ALHHSLG-N 203
            ..|.:          |.|.|..::  |||       |..||   .||.| .||.  .|..||. :
plant   133 MMLFS----------RKRAESWVS--VDE-------EVHKSVRLVASNVGKPLNICKLAFSLSRD 178

  Fly   204 IINDLVFGITYKRDDPDWL--YLQRLQEEGVKLIGVSGVVNFLP-WLRHLPANVRNIRFLLEGKA 265
            |.....||.:....|...|  :|:.:||.. ||.|...|.:::| ||..:.....|.|.     .
plant   179 ITFRAAFGSSSSTSDESRLDEFLEIIQEFS-KLFGEFNVADYVPSWLSWIDPQGINGRV-----E 237

  Fly   266 KTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESD 330
            |.....|..:|:.         :...|.::||                       |.|..|||:|
plant   238 KARKSLDGFIESV---------IDDHLHKKKR-----------------------EHDNVDEETD 270

  Fly   331 EEDT----YEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQR 391
            ..|.    ||.|      :.|.::.:::..|: ::.::.|:...|.:|....:.|.|..:.|...
plant   271 MVDQLLAFYEEE------VKVNNSVTKINLDN-IKGIIMDVMFGGTETVALAIEWVLTEILRSPE 328

  Fly   392 CQRRLH-ELLLPLGPSPTLEE---LEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIK 452
            ..:|:. ||...:|......|   ||.|.:|:..:.||:|:....||.:....|:..:.| |||.
plant   329 NMKRVQDELTSVVGLDRWRVEDTHLEKLTFLKCILKETLRLHPPFPLLLHETVKDTEISG-YFIP 392

  Fly   453 GGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPP------QFIPFSSGYRMCPGEEMA 511
            .||.::.:.:|:..||.::.:||.|.|.|||..    .||.      :|:||.||.|.|||.::.
plant   393 KGSRVMVNTYALGRDPNSWSDPESFNPGRFLNP----IAPDLKGNNFEFVPFGSGRRSCPGMQLG 453

  Fly   512 RMILTLFTGRILRRFHLELPSGT---EVDMAGESGITL--------TPTPHML 553
            .....|....:|..|...||.|.   :||.....|:|:        .||..:|
plant   454 LYAFELAVAHLLHCFTWSLPDGMNPGDVDTVEGPGLTVPKAIPLVAVPTTRLL 506

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
phm	NP_001285414.1	p450	49..555	CDD:278495	145/546 (27%)
CYP84A4	NP_196053.2	p450	31..509	CDD:416425	145/548 (26%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X6
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.000