DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and CYP79B2

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001328605.1 Gene:CYP79B2 / 830154 AraportID:AT4G39950 Length:581 Species:Arabidopsis thaliana


Alignment Length:597 Identity:125/597 - (20%)
Similarity:225/597 - (37%) Gaps:145/597 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SADIVDIG-HTGWMPSVQSLSILLVPGALVLVILYLCERQCNDLMGAP-------PPGPWGLPFL 58
            |:|:.... .|....::..||.|....|:.||:|      ...||..|       ||||.|.|.:
plant    48 SSDLTTTATETSSFSTLYLLSTLQAFVAITLVML------LKKLMTDPNKKKPYLPPGPTGWPII 106

  Fly    59 GYLP-FLDARAPHKSLQKLAKRYG-GIFELKMGRVPTVVLSDAALVRDFFR-RDVMTGRAPL--- 117
            |.:| .|.:|...:.|..:.|:.. .|..:|:|....:.::...:.|:..: :|.:....||   
plant   107 GMIPTMLKSRPVFRWLHSIMKQLNTEIACVKLGNTHVITVTCPKIAREILKQQDALFASRPLTYA 171

  Fly   118 --YLTHG----IMGGFG-------------IICAQEDIWRHARR-ETIDWLKA--LGMTRRPGEL 160
              .|::|    ::..||             ::|.....|.|.:| |..|.|.|  ..|.:..|.:
plant   172 QKILSNGYKTCVITPFGDQFKKMRKVVMTELVCPARHRWLHQKRSEENDHLTAWVYNMVKNSGSV 236

  Fly   161 RARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGI-TYKRDD------ 218
            ..|...|                               |..||.|..|:||. |:.::.      
plant   237 DFRFMTR-------------------------------HYCGNAIKKLMFGTRTFSKNTAPDGGP 270

  Fly   219 --PDWLYLQRLQEEGVKLIGVS---GVVNFLPWLRHLPANVRNIRFLLEGKAKTHAIYDRIVEAC 278
              .|..:::.:.|    .:|.:   .:.::||.|..|..|... :.:.|..|.....:|.|::  
plant   271 TVEDVEHMEAMFE----ALGFTFAFCISDYLPMLTGLDLNGHE-KIMRESSAIMDKYHDPIID-- 328

  Fly   279 GQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPECILEH 343
                 |:.|:::   |.||.|                                     .|..|:.
plant   329 -----ERIKMWR---EGKRTQ-------------------------------------IEDFLDI 348

  Fly   344 FLAVRDTD-SQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRR-LHELLLPLGPS 406
            |::::|.. :.|...|:::..:.:|..|..|.....:.|.:..:..:....|: :.|:...:|..
plant   349 FISIKDEQGNPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMVNKPEILRKAMEEIDRVVGKE 413

  Fly   407 PTLEE--LEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDPV 469
            ..::|  :..|.|::|.:.|..|:..|....:||....:..|..|.|..||.::.|.:.:..:|.
plant   414 RLVQESDIPKLNYVKAILREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPK 478

  Fly   470 AFPEPEEFRPERFLTADGAY---QAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLELP 531
            .:.:|..|:|||.|......   :...:||.||:|.|.|....:...:.|:...|:|:.|..:||
plant   479 VWADPLCFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTALTTMMLARLLQGFTWKLP 543

  Fly   532 SG-TEVDMAGES 542
            .. |.|::...|
plant   544 ENETRVELMESS 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 112/542 (21%)
CYP79B2NP_001328605.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.