DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and CYP83A1

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_193113.1 Gene:CYP83A1 / 827011 AraportID:AT4G13770 Length:502 Species:Arabidopsis thaliana


Alignment Length:563 Identity:134/563 - (23%)
Similarity:233/563 - (41%) Gaps:118/563 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIFELKMGRVP 92
            ||..|:|:...::........||||..||.:|.|..|....|.:.....||:||.|...::|...
plant    10 ALAAVLLFFLYQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRT 74

  Fly    93 TVVLSDAALVRDFFR-RDVMTGRAPLYLTHGIMGGFGIICAQEDI--------WRHARRETIDWL 148
            .||:|.|.|.::..: :||.....|.:..|..: .:|    :.|:        :|..|:      
plant    75 MVVISSAELAKELLKTQDVNFADRPPHRGHEFI-SYG----RRDMALNHYTPYYREIRK------ 128

  Fly   149 KALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGN-IINDLVFGI 212
              :||.......|....:.:..  :|..|:.|...|.:..|||..:..|..:..| ::....||.
plant   129 --MGMNHLFSPTRVATFKHVRE--EEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGK 189

  Fly   213 TYKRDDPDWLYLQRLQEEGVKLI-GVSGVV------NFLPWLRHLPANVRNIRFLLEGKAKTHAI 270
            .|..|..:   ::|.    :|:: |...|:      :|.|:...|..        |.|       
plant   190 KYNEDGEE---MKRF----IKILYGTQSVLGKIFFSDFFPYCGFLDD--------LSG------- 232

  Fly   271 YDRIVEACGQRLKEK-QKVFKELQEQKRLQRQLE----------KEQLRQSKEADPSQEQSEADE 324
            ....::.|.:|.... |:|..|..:.||::.:.|          |||...|:             
plant   233 LTAYMKECFERQDTYIQEVVNETLDPKRVKPETESMIDLLMGIYKEQPFASE------------- 284

  Fly   325 DDEESDEEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLARE 389
                                          :..|.::.::.|:..||.||:.|.:.|.:.||.:.
plant   285 ------------------------------FTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKY 319

  Fly   390 ----QRCQRRLHELLLPLGPS-PTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDY 449
                ::.|..:.|.:...|.: .|.::::.|.|.||.:.||:||..|:||.||..|.::..:..|
plant   320 PQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGY 384

  Fly   450 FIKGGSMIVCSEWAIHMDPVAF-PEPEEFRPERFLTADGAYQAPP-QFIPFSSGYRMCPGEEMAR 512
            .|..|:.:..:.||:..|...: |.|:||||||||..:..::... :||||.||.|||||..:..
plant   385 DIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGA 449

  Fly   513 MILTLFTGRILRRFHLELPSG---TEVDMAGESGITLTPTPHM 552
            .:|.:....:|..|:.:||:|   .:::|...:|:.:..:.|:
plant   450 AMLEVPYANLLLSFNFKLPNGMKPDDINMDVMTGLAMHKSQHL 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 130/542 (24%)
CYP83A1NP_193113.1 PLN02966 1..502 CDD:178550 134/563 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1305
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 157 1.000 Inparanoid score I1659
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.050

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