DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and CYP71A23

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001325471.1 Gene:CYP71A23 / 823988 AraportID:AT3G48300 Length:485 Species:Arabidopsis thaliana


Alignment Length:560 Identity:129/560 - (23%)
Similarity:227/560 - (40%) Gaps:131/560 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VLVILYLC--------------ERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRY 80
            :::||:||              .:..|.::..|.|.  .||.:|.|..| ::.||:||..|:.||
plant     1 MIMILFLCLIILFIITILFFKKHKTVNKIINFPSPP--RLPLIGNLHQL-SQHPHRSLCYLSHRY 62

  Fly    81 GGIFELKMGRVPTVVLSDAALVRDFFR-RDVMTGRAP--------LYLTHGIMGG-FGIICAQED 135
            |.:..|..|.||.:|.|.|...||..: .|.:....|        ||.:..:... :|      :
plant    63 GPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYG------E 121

  Fly   136 IWRHARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHS 200
            .||..:..::..|.:..|.|...::|.          :|...:.:| .:||.:..||    |...
plant   122 YWRQMKSVSVLHLLSNKMVRSFQDVRQ----------EEITLMMET-IRKSSSKPVN----LSKI 171

  Fly   201 LGNIINDLVFGITYKRDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLRHLPANVRNIRFLLEGKA 265
            |.::.||::..:...|........:.|.:..::.:|...:.:::|||                  
plant   172 LSSLTNDVICRVALGRKYGVGTDFKELIDRLMRQLGTFTIGSYVPWL------------------ 218

  Fly   266 KTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESD 330
               |..|.:                     ..|:.:|||    .:.:.|...|:...|.:|.:.|
plant   219 ---AWTDWV---------------------SGLEARLEK----TANDFDKLLERIVQDHEDGDGD 255

  Fly   331 EEDTYEPECILEHFLAVRDTDSQLYCDDQL--RHLLADLFGAGVDTSLATLRWFLLYLAREQRCQ 393
            :.|      .::..||.:...|..:..|:|  :.::.|.|..|.|||...:.|.:..|.|...|.
plant   256 KTD------FVDVLLAAQRDKSFGFDIDRLSIKAIVLDAFVGGTDTSSTLVEWEMTELLRHPTCL 314

  Fly   394 RRLHELLLPL--GPSPTLE-ELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGS 455
            ::|.|.:..:  |.|...| :::.:.||:|.:.|.:|:...|||.:||...::..:.|..|..|:
plant   315 KKLQEEVRTICKGKSSVSEDDIQGMEYLKAVVKEALRLHPPVPLMVPHQSTQDVRLRDNHIPAGT 379

  Fly   456 MIVCSEWAIHMDPVAF-PEPEEFRPERFLTADGAYQAPP-QFIPFSSGYRMCPGEEMA----RMI 514
            .::.:.||:..:...: |:..||||||.|.:...::... :.|||.:|.|||||...|    .::
plant   380 QVIVNLWAVGREAATWGPDANEFRPERHLESPSDFRGQDFELIPFGAGRRMCPGISFAVVLNEVV 444

  Fly   515 LTLFT------------------GRILRRFH--LELPSGT 534
            |....                  |.::||.|  ..:||.|
plant   445 LANLVHGFDWQSIDDETDVAESIGSVIRRMHPLYVIPSST 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 123/527 (23%)
CYP71A23NP_001325471.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1305
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 157 1.000 Inparanoid score I1659
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.050

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