DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and CYP71A24

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001190031.2 Gene:CYP71A24 / 823987 AraportID:AT3G48290 Length:514 Species:Arabidopsis thaliana


Alignment Length:579 Identity:135/579 - (23%)
Similarity:229/579 - (39%) Gaps:132/579 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIF 84
            :.|:|:..:::|:.:...::|........||.|..||.:..|..| .|.||:||..|:.|||.:.
plant     5 MMIILLLCSIILITILFFKKQSRGKKSNAPPSPPRLPLIRNLHQL-GRHPHRSLCSLSHRYGPLM 68

  Fly    85 ELKMGRVPTVVLSDAALVRD----------------FFRRDVMTGRAPLYLTHGIMGGFGIICAQ 133
            .|..|.||.:|:|.|...:|                .|.:....||......:|           
plant    69 LLHFGSVPVLVVSSADAAKDVLKTHDRVFASRPRSKIFDKIFYNGRDVALAPYG----------- 122

  Fly   134 EDIWRHARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALH 198
             :.||..:...:..|.:..|.|...::|           .|.:.|...:.:.|.:..:|....|.
plant   123 -EYWRQMKSVCVLHLFSNKMVRSFRDVR-----------QEEISLMIEKIRISSSLRINLSEILV 175

  Fly   199 HSLGNIINDLVFGITY--KRDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLRHLPANVRNIRFLL 261
            :...|:|..:..|..|  |.|..|  .::||    .:|:|...|.:::.||              
plant   176 NLTNNVICRVALGRKYGGKTDFKD--LMKRL----TRLLGEFSVGSYVSWL-------------- 220

  Fly   262 EGKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDD 326
                   |..|.|....||.:    |:..:|.|  .|:|.:                |...|.|.
plant   221 -------AWIDWIRGLDGQLI----KISNDLDE--FLERVV----------------QDHVDGDG 256

  Fly   327 EESDEED---TYEPE---------CILEHFLAVRD--------TDSQLYCDDQLRHL----LADL 367
            .::|..|   |.|.|         ..::..:.|:.        ||..:|     .|.    ..|:
plant   257 HKNDFVDFLLTIEREKSVGFEIDRLSIKAIILVKGRYENKFKFTDELVY-----NHSSCFGFQDV 316

  Fly   368 FGAGVDTSLATLRWFLLYLAREQRCQRRLHELLLPL-----GPSPTLEELEPLAYLRACISETMR 427
            |...:||:...|.|.:..|.....|..||.|.:..:     |.|.  ::|:.:.||:|.|.||:|
plant   317 FVGDMDTTYTLLEWAMTELLCHHECLDRLQEEVRMVCKDKSGVSE--DDLQDMKYLKAVIKETLR 379

  Fly   428 IRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDPVAF-PEPEEFRPERFLTADGAYQA 491
            :...:||.:||....:..:.||.|..|:.::.:.|||..:...: |:.|||||||.|.:...|:.
plant   380 LHPPLPLMVPHESTHDVKLRDYHIPAGTHVMINAWAIGREAATWGPDAEEFRPERHLNSYVDYRG 444

  Fly   492 -PPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLELPSGT---EVDMAGESGITL 546
             ..:.:||.:|.|:||....|.::..:....::.:|...||..:   :.|:|..:|:.:
plant   445 QDTELVPFGAGRRICPAISFAVVLDEVVLANLVHQFDWTLPEESTEYQTDVAESTGMAV 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 131/550 (24%)
CYP71A24NP_001190031.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1305
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 157 1.000 Inparanoid score I1659
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.050

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