DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and CYP71A25

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_680107.1 Gene:CYP71A25 / 823986 AraportID:AT3G48280 Length:490 Species:Arabidopsis thaliana


Alignment Length:547 Identity:131/547 - (23%)
Similarity:231/547 - (42%) Gaps:94/547 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIF 84
            :.|:|:...:.:.||:| ::|.:...|..||.|.|||.:|.|..| .|..|:||..|::|||.:.
plant     3 MMIILLWSIIFMTILFL-KKQLSGKKGKTPPSPPGLPLIGNLHQL-GRHTHRSLCDLSRRYGPLM 65

  Fly    85 ELKMGRVPTVVLSDAALVRDFFR-RDVMTGRAP--------LYLTHGIMGG-FGIICAQEDIWRH 139
            .|.:||||.:::|.|.:.::..: .|......|        ||....:... :|      :.||.
plant    66 LLHLGRVPVLIVSSADMAQEILKTHDQAFANRPRSKLSQKLLYNNRDVASAPYG------EYWRQ 124

  Fly   140 ARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNI 204
            .:...:..|.:..|.|...::|           :|.:.|...:.:||.:...|....|.....::
plant   125 MKSVCVIHLLSNKMVRSFRDVR-----------EEEITLMMAKIRKSSSLPFNVSKVLECLTNDV 178

  Fly   205 INDLVFGITYKRDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLRHLPANVRNIRFLLEGKAKTHA 269
            |..:..|..|..:........||.|    |:|...:.:|:|||                     |
plant   179 ICRVALGRKYGGETDFKKLTDRLSE----LLGTFSIGSFVPWL---------------------A 218

  Fly   270 IYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDT 334
            ..|.|                     :....||:|    ..|:.|...|  :..:|.|:.|..|.
plant   219 WVDWI---------------------RGWDAQLDK----MGKDLDDFFE--KVVQDHEDGDRRDG 256

  Fly   335 YEPECILEHFLAVRDTDSQLYCDDQ--LRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLH 397
            .:   :::..|.|:...|..:..::  ::.:..|:|..|.|||...|.|.:..|.|..:...||.
plant   257 TD---LIDALLRVKREKSPGFEIERVSIKAITLDVFVGGSDTSFTLLEWAMTELLRHPKSLNRLQ 318

  Fly   398 ELLLPL--GPSPTLE-ELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVC 459
            |.:..:  |.|...| :::.:.||:|.|.|.:|:....|:..||...|:..:.||.|..|:.::.
plant   319 EEVRTICKGKSRVSEDDIQGMKYLKAVIKEALRLHPPFPMMAPHESTEDVKLRDYHIPAGTQVMM 383

  Fly   460 SEWAIHMDPVAF-PEPEEFRPERFLTADGAYQAPP-QFIPFSSGYRMCPGEEMARMILTLFTGRI 522
            :.|||..:...: |:.|||:|||.|.....::... :.:||.:|.|:||....|.::..:....:
plant   384 NAWAIGREVATWGPDAEEFKPERHLDTSVDFRGQNFELLPFGAGRRICPAVSFAVVLNEVVLANL 448

  Fly   523 LRRFHLELPSGT---EVDMAGESGITL 546
            :..|..:||..:   :.|:|..||.::
plant   449 VHGFDWKLPEESKEDKTDVAESSGFSV 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 124/518 (24%)
CYP71A25NP_680107.1 CYP71-like 60..481 CDD:410695 110/488 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1305
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 157 1.000 Inparanoid score I1659
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.050

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