DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and CYP71B38

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_190011.1 Gene:CYP71B38 / 823550 AraportID:AT3G44250 Length:499 Species:Arabidopsis thaliana


Alignment Length:566 Identity:145/566 - (25%)
Similarity:228/566 - (40%) Gaps:108/566 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIFEL 86
            :||:|.:|:|....|..:      |..||||.|||.:|.|..| .:..:||..|:::.||.:..|
plant     8 LLLLPLSLILFKKLLPSK------GKLPPGPIGLPIIGNLHQL-GKLLYKSFHKISQEYGPVVLL 65

  Fly    87 KMGRVPTVVLSDAALVRDFFR-RDVMTGRAPLYLTHGI---------MGGFGIICAQEDIWRHAR 141
            ::|.||.:|:|......:..: .|:.|...|.....|:         ...||      |.||..|
plant    66 RLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFG------DDWREMR 124

  Fly   142 RET------IDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHS 200
            :.|      :..||:....|.  |....|.::|::.|||...           |.|:....|...
plant   125 KITTLELFSVKKLKSFRYIRE--EESELLVKKISKSVDETQN-----------SSVDLRKVLFSF 176

  Fly   201 LGNIINDLVFGITYKRDDPDWLYLQRLQEEGVKLIGVSGVVNFLP--WLRHLPANVRNIRFLLEG 263
            ..:||..|.||..:.:.|.....|:.|..|....:|.....:|.|  ||                
plant   177 TASIICRLAFGQNFHQCDFVDASLEELVLESEANLGTFAFADFFPGGWL---------------- 225

  Fly   264 KAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEE 328
                   .|||   .||.    .:|.|...:.....:.:..:.|:..:..|.|...|        
plant   226 -------IDRI---SGQH----SRVNKAFYKLTNFYKHVIDDHLKTGQPQDHSDIVS-------- 268

  Fly   329 SDEEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQ 393
                      .:|:........||.....|.|:.:::|:|.|||:....|:.|.|..|:|..|..
plant   269 ----------VMLDMINKPTKADSFKVTYDHLKGVMSDIFLAGVNGGANTMIWTLTELSRHPRVM 323

  Fly   394 RRL-HELLLPLGPSP---TLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGG 454
            ::| .|:...|||:.   |.|:||.:.||:..:.||.|:....||.:|.....:..:..|.|...
plant   324 KKLQEEIRAMLGPNKERITEEDLEKVEYLKLVMVETFRLHPPAPLLLPRLTMSDIKIQGYNIPKN 388

  Fly   455 SMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPP-QFIPFSSGYRMCPGEEMARMILTLF 518
            :||..:.:||..||..:.:|.||.|||||.:...|:... :.:||.:|.|:|||......::.|.
plant   389 TMIQINTYAIGRDPKYWKQPGEFIPERFLDSPIDYKGQHFELLPFGAGRRICPGMATGITMVELG 453

  Fly   519 TGRILRRFHLELPSG---TEVDMAGESGITLTPTPHMLRFTKLPAV 561
            ...:|..|...||:|   .::||..:.|..:.        .|:|.|
plant   454 LLNLLYFFDWSLPNGMTIEDIDMEEDEGFAIA--------KKVPLV 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 135/531 (25%)
CYP71B38NP_190011.1 p450 27..497 CDD:386267 138/541 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1305
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 157 1.000 Inparanoid score I1659
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.050

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