DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and CYP71B24

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_189254.1 Gene:CYP71B24 / 822224 AraportID:AT3G26230 Length:498 Species:Arabidopsis thaliana


Alignment Length:567 Identity:133/567 - (23%)
Similarity:229/567 - (40%) Gaps:105/567 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIF 84
            :||||...||:.:|:.   ::..|.....||.|..||.:|.|..|.... ||.|..|:|::|.:.
plant     1 MSILLYFIALLSLIII---KKIKDSNRNLPPSPLKLPVIGNLYQLRGLF-HKCLHDLSKKHGPVL 61

  Fly    85 ELKMGRVPTVVLSDAALVRDFFR-RDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHAR------- 141
            .|::|.:..||:|......:..: .|:.....|            |......:||..:       
plant    62 LLRLGFLDMVVISSTEAAEEALKVHDLECCTRP------------ITNVTSKLWRDGQDIGLAPY 114

  Fly   142 RETIDWLKALGMTRRPGELRARLERRIARGVDECV--RLFDTEAKKSCASEVNPLPALHHSLGNI 204
            .|::..|:.|...:.....:.|..|.|....::.:  :|.:...||   |.|:....|...:|:|
plant   115 GESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKLKEAALKK---SSVDLSQTLFGLVGSI 176

  Fly   205 INDLVFGITYKRDDPDWLYLQRLQE---EGVKLIGVSGVVNF---LPWLRHLPANVRNIRFLLEG 263
            |....||..:  |:.:.:..:::::   |..||..:|....|   |.|.         :.|:...
plant   177 IFRSAFGQRF--DEGNHVNAEKIEDLMFEVQKLGALSNSDLFPGGLGWF---------VDFVSGH 230

  Fly   264 KAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEE 328
            ..|.|                  |||.|:.   .|...:..:.|:                   .
plant   231 NKKLH------------------KVFVEVD---TLLNHIIDDHLK-------------------N 255

  Fly   329 SDEEDTYEPECILEHFLAV----RDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLARE 389
            |.||.|::...|::..|.:    ...||.....|.|:.::.|::.||||||..|:.|.:..|.:.
plant   256 SIEEITHDRPDIIDSLLDMIRKQEQGDSFKLTIDNLKGIIQDIYLAGVDTSAITMIWAMAELVKN 320

  Fly   390 QRCQRRLHELL---LPLGPSPTLEE--LEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDY 449
            .|..:::.:.:   :.:..:..:||  ::.|.||:..:.||:|:....||.:|........:..|
plant   321 PRVMKKVQDEIRTCIGIKQNEKIEEDDVDKLQYLKLVVKETLRLHPAAPLLLPRETMSQIKIQGY 385

  Fly   450 FIKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPP-QFIPFSSGYRMCPGEEMARM 513
            .|...::::.:.|:|..||..:..||||.||||:.....|:... :.:||.||.|:|||...|..
plant   386 NIPSKTILLVNVWSIGRDPKHWKNPEEFNPERFIDCPIDYKGNSFEMLPFGSGRRICPGIAFAIA 450

  Fly   514 ILTLFTGRILRRFHLELP-SGTEVDMAGESGIT--------LTPTPH 551
            .:.|....:|..|...|| ...::||.....:|        |.|..|
plant   451 TVELGLLNLLYHFDWRLPEEDKDLDMEEAGDVTIIKKVPLKLVPVLH 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 125/538 (23%)
CYP71B24NP_189254.1 p450 1..495 CDD:299894 131/563 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1305
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 157 1.000 Inparanoid score I1659
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.050

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