DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and CYP77A6

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_187668.1 Gene:CYP77A6 / 820222 AraportID:AT3G10570 Length:513 Species:Arabidopsis thaliana


Alignment Length:587 Identity:126/587 - (21%)
Similarity:229/587 - (39%) Gaps:135/587 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IVDIGHTGWMPSVQSLSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAP 69
            |:...||.:..|......:|:..   ||:|.|..|.....:...||||.|.|.:|.| |..||:.
plant     3 ILSFPHTFFNISPSLFYTILISS---LVLLILTRRSAKSKIVKLPPGPPGWPVVGNL-FQFARSG 63

  Fly    70 ---HKSLQKLAKRYGGIFELKMGRVPTVVLSDAALVRDFFRRDVMTGRAPLYLTHGIMGGFGII- 130
               ::.:..:.|:||.|:.|:||....:::||:|||     .||:..|.|::.|.........| 
plant    64 KQFYEYVDDVRKKYGPIYTLRMGSRTMIIISDSALV-----HDVLIQRGPMFATRPTENPTRTIF 123

  Fly   131 ---------CAQEDIWRHARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKS 186
                     .|...:||..|:..:..:.:....|..|.||       ...:|:.|....:|||.:
plant   124 SSNTFTVNASAYGPVWRSLRKNMVQNMLSSIRFREFGSLR-------QSAMDKLVERIKSEAKDN 181

  Fly   187 CASEVNPLPALHHSLGN-------IINDLVFGITYKRDDPDWLYLQRLQEEGVKLIGVS-GVVNF 243
                    ..|...|.|       |:.::.|||  :.|:...|.:.::.::  .||.:: .:.::
plant   182 --------DGLVWVLRNARFAAFCILLEMCFGI--EMDEESILNMDQVMKK--VLITLNPRLDDY 234

  Fly   244 LPWL---------RHLPANVRNIRFLLEGKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQ 299
            ||.|         |.|......:.|::           :::|                    |.:
plant   235 LPILAPFYSKERARALEVRCEQVDFIV-----------KLIE--------------------RRR 268

  Fly   300 RQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPECILEHFLAVRDTDSQLYCD------- 357
            |.::|          |..:::.:.                     .:..||...|..:       
plant   269 RAIQK----------PGTDKTASS---------------------FSYLDTLFDLKTEGRITTPS 302

  Fly   358 -DQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLH-ELLLPLGPSPTLE-ELEPLAYLR 419
             ::|..|.::....|.||:...:.|.:..|......|.||: |:...:|.....| :::.:.:|:
plant   303 NEELVSLCSEFLNGGTDTTGTAIEWGIAQLIVNPEIQSRLYDEIKSTVGDREVEEKDVDKMVFLQ 367

  Fly   420 ACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLT 484
            |.:.|.:|........:.|...|...|..|.:..|..:......|:.||..:.:|::|.|:||::
plant   368 AVVKEILRKHPPTYFTLTHSVTEPTTVAGYDVPVGINVEFYLPGINEDPKLWSDPKKFNPDRFIS 432

  Fly   485 ----ADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLE-LPSGTEVDMAGESGI 544
                ||.......:.:||..|.|:|||..||.:.:.|...::::.|... .|..:|:|.||:...
plant   433 GKEEADITGVTGVKMMPFGIGRRICPGLAMATVHVHLMLAKMVQEFEWSAYPPESEIDFAGKLEF 497

  Fly   545 TL 546
            |:
plant   498 TV 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 116/543 (21%)
CYP77A6NP_187668.1 PLN00168 55..512 CDD:215086 109/532 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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