DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and CYP76C1

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_850439.1 Gene:CYP76C1 / 819164 AraportID:AT2G45560 Length:512 Species:Arabidopsis thaliana


Alignment Length:562 Identity:140/562 - (24%)
Similarity:250/562 - (44%) Gaps:97/562 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SVQSLSILLVPGALVLVILYLCERQCNDLMGAP--PPGPWGLPFLGYLPFLDARAPHKSLQKLAK 78
            |.|:| :||....|...:::...|......||.  ||||..||.:|.: .|..:.||:|..:|:|
plant     5 SGQAL-LLLFCFILSCFLIFTTTRSGRISRGATALPPGPPRLPIIGNI-HLVGKHPHRSFAELSK 67

  Fly    79 RYGGIFELKMGRVPTVVLSDAALVRDFFRR--DVMTGRAPLYLTHGIMGGFGIICAQEDI----- 136
            .||.:..||:|.:.|||::.....|:..|.  .:::.|:|......|        ..:|.     
plant    68 TYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSI--------NHQDASLVWL 124

  Fly   137 ------WRHARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLP 195
                  ||..||.::..|.:      |..:.|....|:.: |.|.|......:.:..:.:::.:.
plant   125 PSSSARWRLLRRLSVTQLLS------PQRIEATKALRMNK-VKELVSFISESSDREESVDISRVA 182

  Fly   196 ALHHSLGNIINDLVFGI---TYKRDDPDWLYLQRLQEEGVKLIGVSG---VVNFLPWLRHLPANV 254
            .:  :..|||::::|.:   :|...    ..:..:|:..:.::..:|   ..|:.|:||.|.   
plant   183 FI--TTLNIISNILFSVDLGSYNAK----ASINGVQDTVISVMDAAGTPDAANYFPFLRFLD--- 238

  Fly   255 RNIRFLLEGKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQ 319
                  |:|..||..:       |.:||   .:||:...:.|..::         |.:.:|    
plant   239 ------LQGNVKTFKV-------CTERL---VRVFRGFIDAKIAEK---------SSQNNP---- 274

  Fly   320 SEADEDDEESDEEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLL 384
                :|..::|         .:::.|..:..:|:|...| :.|||.|:|.||.|||.:||.|.:.
plant   275 ----KDVSKND---------FVDNLLDYKGDESELSISD-IEHLLLDMFTAGTDTSSSTLEWAMT 325

  Fly   385 YLAREQRCQRRLH-ELLLPLGPSPTLEE--LEPLAYLRACISETMRIRSVVPLGIPHGCKENFVV 446
            .|.:..:...:.. |:...:|.:..:||  :..|.||:|.:.||.|:.:.|||.||...:.:..:
plant   326 ELLKNPKTMAKAQAEIDCVIGQNGIVEESDISKLPYLQAVVKETFRLHTPVPLLIPRKAESDAEI 390

  Fly   447 GDYFIKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPP-QFIPFSSGYRMCPGEEM 510
            ..:.:...:.::.:.|||..||..:..|.:|.|||||..|...:... :..||.:|.|:|||..:
plant   391 LGFMVLKDTQVLVNVWAIGRDPSVWDNPSQFEPERFLGKDMDVRGRDYELTPFGAGRRICPGMPL 455

  Fly   511 ARMILTLFTGRILRRFHLELPSGT---EVDMAGESGITLTPT 549
            |...::|....:|..|..:||.|.   ::||....|:||..|
plant   456 AMKTVSLMLASLLYSFDWKLPKGVLSEDLDMDETFGLTLHKT 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 131/527 (25%)
CYP76C1NP_850439.1 p450 11..505 CDD:386267 137/555 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1305
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 157 1.000 Inparanoid score I1659
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.050

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