DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and CYP76C4

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_182079.1 Gene:CYP76C4 / 819163 AraportID:AT2G45550 Length:511 Species:Arabidopsis thaliana


Alignment Length:535 Identity:127/535 - (23%)
Similarity:228/535 - (42%) Gaps:110/535 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIFELKMGRVPTVVLSDAALVRDFFRR--DVM 111
            ||||..||.:|.:..: .:.||.|...|||.||.|..||.|.:.:||::.....|:..|.  .::
plant    39 PPGPPRLPIIGNIHQV-GKNPHSSFADLAKIYGPIMSLKFGCLNSVVITSPEAAREVLRTHDQIL 102

  Fly   112 TGRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDWLKALGMTRRPGELRARLERRIA------- 169
            :||.    ::..:..||    .|::       ::.||.       |...|.|:.|:::       
plant   103 SGRK----SNDSIRCFG----HEEV-------SVIWLP-------PSSARWRMLRKLSVTLMFSP 145

  Fly   170 -----------RGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGI---TYKRDDPD 220
                       :.|.|.|...:..:::..|.:::  .|.:.::.|||::::|.:   :|     |
plant   146 QRTEATKALRMKKVQELVSFMNESSERKEAVDIS--RASYTTVLNIISNILFSVDLGSY-----D 203

  Fly   221 WLYLQRLQEEGVKLIGVSG---VVNFLPWLRHLPANVRNIRFLLEGKAKT-HAIYDRIVEACGQR 281
            .......|:..:..:..:|   ..|:.|::..|.         |:|..|. ..:.:|:.      
plant   204 SKKSNEFQDTVIGAMEAAGKPDAANYFPFMGFLD---------LQGNRKAMRGLTERLF------ 253

  Fly   282 LKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPECILEHFLA 346
                 :||:...:.|..::.|          .:.|::.|..|                .|:..|.
plant   254 -----RVFRGFMDAKIAEKSL----------GNYSKDVSNRD----------------FLDSLLI 287

  Fly   347 VRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLH-ELLLPLGPSPTLE 410
            :.:.|.....::.:.|||.|:|.||.|||.:||.|.:..|.|..:...:.. |:...||.:..::
plant   288 LNEGDEAELDNNDIEHLLLDMFTAGTDTSSSTLEWAMAELLRNPKTMVKAQAEMDRVLGQNSVVQ 352

  Fly   411 E--LEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDPVAFPE 473
            |  :..|.||:|.:.||.|:....||.:|...:.:..|..:.:...:.::.:.|||..||..:..
plant   353 ESDISGLPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWEN 417

  Fly   474 PEEFRPERFLTADGAYQAPP-QFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLELPSGT--- 534
            |.:|.||||:..|...:... :..||..|.|:|||..:|...::|....:|..|..:||:|.   
plant   418 PSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPNGVVSE 482

  Fly   535 EVDMAGESGITLTPT 549
            ::||....||||..|
plant   483 DLDMDETFGITLHRT 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 127/535 (24%)
CYP76C4NP_182079.1 p450 11..505 CDD:299894 127/535 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1305
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 157 1.000 Inparanoid score I1659
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.050

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