DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and CYP82F1

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_180088.1 Gene:CYP82F1 / 817054 AraportID:AT2G25160 Length:527 Species:Arabidopsis thaliana


Alignment Length:583 Identity:146/583 - (25%)
Similarity:216/583 - (37%) Gaps:152/583 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LSILLVPGALVLVILYLCERQCNDLMGAP-PPGPWGLPFLGYLPFLDARAP-HKSLQKLAKRYGG 82
            ||.|.:...|:|:...|  |..|....|| .||.|  |.||:|...|...| |.:...:|..||.
plant     9 LSALFIFPVLILIKSRL--RPKNKKSTAPMVPGAW--PLLGHLHLFDTVNPTHVTFGAMADVYGP 69

  Fly    83 IFELKMGRVPTVVLSDAALVRDFFRRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDW 147
            :|..|:|.:..::::...:.::            :|..|.               :...|..:..
plant    70 VFMAKLGSIKVMIINSKEVAKE------------IYTVHD---------------KLLERPELTA 107

  Fly   148 LKALG-----MTRRPGELRARLERRIARGVDECVRLFDTEA----KKSCASEVNPLPALHHSLGN 203
            .|.||     :|..|..|..|..|:||  |.|   ||.|..    ..|.|.|.            
plant   108 SKLLGYNDSFLTFSPYGLYWREIRKIA--VSE---LFSTSGVDMHMVSRAREA------------ 155

  Fly   204 IINDLVFGITY----KRDDPDWLYLQRLQEE------GVKLIGVSGVVNFLPWLRHLPAN----V 254
               ||.|...|    ||..|....|..:::|      .:.|:.|||       .|:...|    |
plant   156 ---DLAFRALYVRWEKRGKPKEGVLVDMKQEFIDLTANISLMMVSG-------KRYFGENPNCEV 210

  Fly   255 RNIRFLLEGKAKTHAIYDRIVEACGQRLKEKQKVF-----------------KELQEQKRLQRQL 302
            :..|                  .||:.::|....|                 |..:..||..:.|
plant   211 KEAR------------------RCGKLIREFLDYFALFLLSDVAPVLGFLDWKTKRGMKRTAKGL 257

  Fly   303 EKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPECILEHFL------AVRDTDSQLYCDDQLR 361
            :       |.|:...|:.:....|....|.|..:   ||...|      .:.||.:      :::
plant   258 D-------KVAEGWIEEHKNKRSDHGRSENDYLD---ILIKILGQDKIPGLSDTHT------KIK 306

  Fly   362 HLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLHELL-LPLGPSPTLEELE--PLAYLRACIS 423
            .|..:|..||.:|::..|.|.:..|.......|:..|.| ..:|....:|||:  .|.||:|.:.
plant   307 ALCLNLVLAGSETAIVVLVWAVSLLLNNPHVLRKAQEELDSKIGKERVVEELDIKDLVYLQAIVK 371

  Fly   424 ETMRIRSVVPLGIPHGCKENFVVGDYFIK----GGSMIVCSEWAIHMDPVAFPEPEEFRPERFLT 484
            ||.|:...|||.......|:|.:.  |.|    .|:.::.|.|.||.||..:..||:|.||||||
plant   372 ETFRLYPPVPLVAYRAVVEDFDIA--FCKCHVPAGTQLMVSAWKIHRDPNVWSNPEQFEPERFLT 434

  Fly   485 ADGAYQAPPQ---FIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLELPSGTEVDMAGESGI 544
            ::.......|   |.||..|.|.||...:...::.....|.|..|.|..||..:|||...:|:
plant   435 SNRELDVGGQSYKFFPFGLGRRSCPAIPLGMRMVHYLLVRFLHSFDLARPSSQDVDMTESNGL 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 136/553 (25%)
CYP82F1NP_180088.1 p450 6..520 CDD:299894 146/583 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1305
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 157 1.000 Inparanoid score I1659
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.050

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