DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and CYP79B3

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001323954.1 Gene:CYP79B3 / 816765 AraportID:AT2G22330 Length:566 Species:Arabidopsis thaliana


Alignment Length:627 Identity:132/627 - (21%)
Similarity:235/627 - (37%) Gaps:157/627 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SADIVDIGHTGWMPSVQSLSILLVPGAL-----VLVILYLCERQCNDLMGAPPPGPWGLPFLGYL 61
            |:|:......| |.|..::.:|....||     ::::..:.....|..:...||||.|.|.:|.:
plant    31 SSDLTTKSSLG-MSSFTNMYLLTTLQALAALCFLMILNKIKSSSRNKKLHPLPPGPTGFPIVGMI 94

  Fly    62 P-FLDARAPHKSLQKLAKRYG-GIFELKMGRVPTVVLSDAALVRDFFR-RDVMTGRAPL-----Y 118
            | .|..|...:.|..|.|... .|..:::|....:.::...:.|:.|: :|.:....||     .
plant    95 PAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQKI 159

  Fly   119 LTHG----IMGGFG-------------IICAQEDIWRHARR-ETID----WLKALGMTRRPGELR 161
            |::|    ::..||             |:|.....|.|..| |..|    ||..:.....|.:||
plant   160 LSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLR 224

  Fly   162 ARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGITYKRDDPDWLYLQR 226
                             |.|                .|..||.|..|:||..        .:.::
plant   225 -----------------FVT----------------RHYCGNAIKRLMFGTR--------TFSEK 248

  Fly   227 LQEEGVKLIGVSGVVNFLPWLRHLPANVRNIRFLLEGKAKTHA--IYDRIVEACGQRLKEKQKVF 289
            .:.:|    |.:     |..:.|:.|       :.||...|.|  |.|.:....|..|...:|:.
plant   249 TEADG----GPT-----LEDIEHMDA-------MFEGLGFTFAFCISDYLPMLTGLDLNGHEKIM 297

  Fly   290 KE------------LQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPECILE 342
            :|            :.|:.::.|:.::.|:                              |..|:
plant   298 RESSAIMDKYHDPIIDERIKMWREGKRTQI------------------------------EDFLD 332

  Fly   343 HFLAVRDTDSQ-LYCDDQLRHLLADLFGAGVDTSLATLRWFLL-YLAREQRCQRRLHELLLPLGP 405
            .|::::|...| |...|:::..:.:|..|..|.....:.|.:. .:.:.:...:.:.|:...:|.
plant   333 IFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAIAEMINKPEILHKAMEEIDRVVGK 397

  Fly   406 SPTLEE--LEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDP 468
            ...::|  :..|.|::|.|.|..|:..|....:||....:..|..|.|..||.::.|.:.:..:|
plant   398 ERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNP 462

  Fly   469 VAFPEPEEFRPERFLTADGAY---QAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLEL 530
            ..:.:|..|:|||.|......   :...:||.||:|.|.|....:...|.|:...|:|:.|..:|
plant   463 KVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKL 527

  Fly   531 PSGTEVDMAG-ESGITLTPTPHMLRFTKLPAV---EMRHAPD 568
                    || |:.:.|..:.|.: |...|.|   |:|.:.|
plant   528 --------AGSETRVELMESSHDM-FLSKPLVLVGELRLSED 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 117/557 (21%)
CYP79B3NP_001323954.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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