DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and cyp2ad6

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001076405.1 Gene:cyp2ad6 / 799957 ZFINID:ZDB-GENE-041001-157 Length:492 Species:Danio rerio


Alignment Length:573 Identity:145/573 - (25%)
Similarity:243/573 - (42%) Gaps:116/573 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DIVDIGHTGWMPSVQSLSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARA 68
            |.:|.  .||        :.|....|:|:.|...:...|.     |||||.||.||.: |.|.. 
Zfish     8 DCLDF--KGW--------LFLTCFLLLLIDLIRNKNPANF-----PPGPWPLPILGNV-FTDVN- 55

  Fly    69 PHKSLQKLAKRYGGIFELKMGRVPTVVLSDAALVRD--------FFRRDVMTGRAPLYLTHGIMG 125
             :|::.:|.::||.||.:::|....|.:|...:|:|        |..|.|    :||:.|  :..
Zfish    56 -YKTVDQLIEKYGNIFSVRIGSDKIVYVSGFKMVKDVLITQGENFTDRPV----SPLFDT--LYK 113

  Fly   126 GFGIICAQEDIWRHARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASE 190
            |.|:.......||..::.::..||..      ||.|..||....|   ||..|... .|:.....
Zfish   114 GRGLSFNNGYSWRKHQQFSMSHLKNF------GEGRKTLEENNQR---ECYFLCGA-FKEEQGRP 168

  Fly   191 VNPLPALHHSLGNIINDLVFGITYKRDDPDWLYLQRLQEEGVKLIG---------VSGVVNFLPW 246
            .:||..:::::.|:|..||||..|:..|.::....::..|.|.|.|         ..|::.::| 
Zfish   169 FDPLVKINNAVANVIGFLVFGHRYEYSDVNFQKRLQMSAESVFLTGSVWNQLYDAFPGIMKWVP- 232

  Fly   247 LRHLPANVRNIRFLLEGKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSK 311
                            |..:|             .:...||:...|:|:                
Zfish   233 ----------------GPHQT-------------IISNYQKLANFLEEK---------------- 252

  Fly   312 EADPSQEQSEADED-DEESDEEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTS 375
                 .||.:.|.| ....|..|.|    :.|......||::. :....|...:.|||..|.:|:
Zfish   253 -----IEQHKPDWDISNPRDYIDAY----LTEAEKKKNDTEAG-FTVGSLVWSMVDLFEGGTETT 307

  Fly   376 LATLRWFLLYLAR----EQRCQRRLHELLLPLGPS-PTLEELEPLAYLRACISETMRIRSVVPLG 435
            ..||||.||:|.:    :::.|..:.|:   :|.. |::.:...:.||.|.|.|.:|..::|||.
Zfish   308 TNTLRWALLFLIKYPDIQKKVQAEIDEV---IGSRLPSMSDKANMHYLNAFIHEVLRRANLVPLN 369

  Fly   436 IPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSS 500
            :....|::..:|.|||..|::::.:..::..|...:..|:.|.|:.||.::|.:.....|..||:
Zfish   370 MARVAKKDTTLGGYFITKGTVMITNLTSVLYDKQEWETPDAFNPKHFLDSEGHFCRRNAFFAFSA 434

  Fly   501 GYRMCPGEEMARMILTLFTGRILRRFHLELPSGTEVDMAGESGITLTPTPHML 553
            |.|.||||.:|.:.|.:|...:|:.|....|.|.|..:..:.|.|..|.|:.:
Zfish   435 GKRQCPGEYLAHLELFIFLTILLQTFSFSPPDGEEPSLDSQVGFTQAPLPYKI 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 136/528 (26%)
cyp2ad6NP_001076405.1 p450 38..488 CDD:278495 136/528 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.000

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