DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2b15

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001129140.1 Gene:Cyp2b15 / 685222 RGDID:1596474 Length:495 Species:Rattus norvegicus


Alignment Length:557 Identity:142/557 - (25%)
Similarity:239/557 - (42%) Gaps:91/557 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIF 84
            |.:||:....|..:|.|..:......|..||||..|||||.|..::.|...:|..:|.::||.:|
  Rat     3 LGVLLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVF 67

  Fly    85 ELKMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDW 147
            .:.:|..|.|:|.....:|:..  :.:..:||..:.:.|.::.|:|:|.|..:.|:..||.::..
  Rat    68 TVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVT 132

  Fly   148 LKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGI 212
            ::..||.:|..|.|.:.|.       :|:   ..|.||...:.:||.........|||..:|||.
  Rat   133 MRNFGMGKRSVEERIKEEA-------QCL---VEELKKYKGALLNPTSIFQSIAANIICSIVFGE 187

  Fly   213 TYKRDDPDWLYLQRLQEEGVKLIG---------VSGVVNFLPWLRHLPANVRNIRFLLEGKAKTH 268
            .:...|..:|.|..|..:...|:|         .||.:.:.|.:.                    
  Rat   188 RFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVH-------------------- 232

  Fly   269 AIYDRIVEACGQRLKEKQKVFKELQE-QKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEE 332
                             :::.|.||| ...:...:||.:    ...||:..:          |..
  Rat   233 -----------------KQISKNLQEILNYIDHSVEKHR----ATLDPNTPR----------DFI 266

  Fly   333 DTYEPECILEHFLAVRDTDSQLYCDDQLRHL---LADLFGAGVDTSLATLRW-FLLYLAREQRCQ 393
            :||        .|.:....|..:.:...::|   :..||..|.:|:..|||: ||:.|......:
  Rat   267 NTY--------LLRMEKEKSNHHTEFHHQNLVISVLSLFFTGTETTSTTLRYSFLIMLKYPHVAE 323

  Fly   394 RRLHELLLPLGPS--PTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFI-KGGS 455
            :...|:...:|..  |||::...:.|..|.|.|..|...::|:|:||....:.:...|.: |...
  Rat   324 KVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTE 388

  Fly   456 MIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTG 520
            :......|:| ||..|..|:.|.||.||..:|..:....|:|||:|.|:|.||.:|:..|.:|..
  Rat   389 VYPILSSALH-DPRYFDHPDTFNPEHFLDVNGTLKKSEAFLPFSTGKRICLGEGIAQNELFIFFT 452

  Fly   521 RILRRFHLELPSGTE-VDMAG-ESGITLTPTPHMLRF 555
            .||:.|.|..|...| :|::. .|||:..|:|:.:.|
  Rat   453 AILQNFSLASPVAPEDIDLSPINSGISKIPSPYQIHF 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 134/526 (25%)
Cyp2b15NP_001129140.1 p450 32..487 CDD:278495 134/524 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.000

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