DRSC/TRiP Functional Genomics Resources

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Protein Alignment phm and Cyp2ab1

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:XP_017453675.1 Gene:Cyp2ab1 / 679979 RGDID:1586963 Length:494 Species:Rattus norvegicus


Alignment Length:493 Identity:129/493 - (26%)
Similarity:216/493 - (43%) Gaps:79/493 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 KLAKRYGGIFELKMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIW 137
            :||:.:|.:|.:.:|..|.|||:....|::..  ..:..:||........:.|..|:||:....|
  Rat    53 QLAQTHGNVFTVWLGSTPIVVLNGFRAVKEALVSNSEQFSGRPLTPFFRDLFGEKGVICSNGLTW 117

  Fly   138 RHARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLG 202
            |..||..:..|:.||:.::..||:.:.|      ..|...:|..|..::    .:|...:..|..
  Rat   118 RQQRRFCLTTLRELGLGKQALELQLQHE------AAELAEVFHQEQGRA----FDPQVPIIRSTT 172

  Fly   203 NIINDLVFGITYKRDDPDWLYLQRLQEEGVKLIGVS--GVVNFLPW-LRHLPANVRNIRFLLEGK 264
            .:|..||||..:..::|.:|.|.|....|:.....:  .:.:..|| ||:|..            
  Rat   173 RVIGALVFGHHFLSEEPIFLELIRAINLGLAFASTTWRRLYDMFPWALRYLSG------------ 225

  Fly   265 AKTHAIYDRIVEACGQRLKEKQKVFKELQEQKR--LQRQLEKEQLRQSKEADPSQEQSEADEDDE 327
                               ..||:| :..|..|  :..::.:.:||          ..||.:|  
  Rat   226 -------------------PHQKIF-QYHEAVRGFIHHEIIRHKLR----------TPEAPKD-- 258

  Fly   328 ESDEEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYL----AR 388
                    ...|.|.......|.....:.::.|..::.|||..|.||:..||.|.::||    |.
  Rat   259 --------FISCYLSQITKAMDDPVSTFSEENLIQVVIDLFLGGTDTTATTLHWAIIYLVHHRAI 315

  Fly   389 EQRCQRRLHELLLPLGPSPTL--EELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFI 451
            ::|.|:.|.|:   ||.:..:  |:.|.|.|.||.:.|..|:.|||.:|....|.....:..|::
  Rat   316 QERVQQELDEV---LGTAQAVCYEDRERLPYTRAVLHEVQRLSSVVAVGAVRQCVTPTWMHGYYV 377

  Fly   452 KGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILT 516
            ..|::|:.:..::..||..:..|.:|.|..||..||.:.....|:|||:|:|:||||::|||.|.
  Rat   378 SKGTIILPNLASVLCDPECWETPHQFNPGHFLDKDGDFVTNEAFLPFSAGHRVCPGEQLARMELF 442

  Fly   517 LFTGRILRRFHLELPSGTE-VDMAGESGITLTPTPHML 553
            |....:||.|..:||.|:: :.:....|.||.|.|..:
  Rat   443 LMFATLLRTFRFQLPEGSQGLRLEYVFGGTLQPQPQKI 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 129/493 (26%)
Cyp2ab1XP_017453675.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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