DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and cyp2ad3

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001020725.1 Gene:cyp2ad3 / 569245 ZFINID:ZDB-GENE-041001-156 Length:493 Species:Danio rerio


Alignment Length:547 Identity:146/547 - (26%)
Similarity:240/547 - (43%) Gaps:95/547 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ILLVPGALVLVILYLCERQCNDLM-----GAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYG 81
            |||..|.|:||          ||:     .:.||||..|||||.: |.:.: ..:::.|||:.||
Zfish    16 ILLGFGLLLLV----------DLIKYWNPSSFPPGPRPLPFLGNV-FTEIQ-DFRNINKLAQVYG 68

  Fly    82 GIFELKMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRET 144
            .||.|::|....:::|...:.::..  :.|....|..:.|.|.:..|.|.|.:...:||..|:..
Zfish    69 TIFSLRLGSEKLIIVSGYKMAKEALVTQNDSFIDRPNVPLFHKVFKGLGTILSNGYLWRMHRKFA 133

  Fly   145 IDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLV 209
            :..|:..|:.....|::.:         .||:.|.|  |.|:....|:|:..|:.::.|||:.|:
Zfish   134 VSHLRNFGVGNESLEVKIQ---------QECIFLCD--AFKAEKGPVDPMVTLNSAISNIISSLI 187

  Fly   210 FGITYKRDDPDWLYLQRLQEEGVKLIGV--SGVVNFLPWL-RHLPANVRNIRFLLEGKAKTHAIY 271
            ||..:...|..:..:.||..|.::|.|.  :.:.|..||| .:||.                   
Zfish   188 FGQRFDYHDEYYQRILRLDTECIQLAGSPRAQLYNACPWLFEYLPG------------------- 233

  Fly   272 DRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADE-----DDEESDE 331
                        ..|.:|   ...|:::..|..|.::..::.||:..:...|.     :.::||.
Zfish   234 ------------PHQTIF---SNYKKIKDFLRGEIIKHREDWDPANPRDFIDNYLTEMERKKSDP 283

  Fly   332 EDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRL 396
            |..:..|.::...|                    ||..||.:|:..||||.||::.:....|.::
Zfish   284 EAGFNIEGLVVTCL--------------------DLIEAGTETATTTLRWGLLFMIKFPEIQEKV 328

  Fly   397 H-ELLLPLGPS--PTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIV 458
            . |:...:|.|  |.|.:...:.|..|.|.|..|...|||||.|....::..:|.|||..|:.|.
Zfish   329 QAEIDRVIGQSRQPCLNDRVNMPYTEAVIHEIQRFGDVVPLGFPKRAVKDTQLGKYFIPKGTAIT 393

  Fly   459 CSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRIL 523
            .:..::..||..:..|:.|.|..||...|.::....|:|||:|.|.|.||.:||..|.|:...:|
Zfish   394 VNLSSVLHDPNEWETPDTFNPGHFLDEIGQFRKRDAFMPFSAGKRACLGENLARQELFLYFTSLL 458

  Fly   524 RRFHLELPSGTEVDMAGESGITLTPTP 550
            ::|.:....|.|..:.||...|..|.|
Zfish   459 QQFKISKCPGEEPSLEGEIWFTYAPAP 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 137/515 (27%)
cyp2ad3NP_001020725.1 p450 38..471 CDD:278495 131/499 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.000

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