DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and cyp2aa12

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001103171.2 Gene:cyp2aa12 / 555510 ZFINID:ZDB-GENE-071004-47 Length:501 Species:Danio rerio


Alignment Length:543 Identity:146/543 - (26%)
Similarity:243/543 - (44%) Gaps:76/543 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SLSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLP-FL-DARAPHKSLQKLAKRYG 81
            |:.:.|..|.:.||:..:.  :.....|..||||..|||:|.:| || |:....:||    .:||
Zfish    12 SVGLTLFLGLIFLVVFEIF--RIRSYSGRFPPGPTPLPFVGTIPHFLKDSMGFIRSL----SQYG 70

  Fly    82 GIFELKMGRVPTVVLSDAALVRDFFRRD--VMTGRAPLYLTHGIMGGFGIICAQ-EDIWRHARRE 143
            .:..:.:||.|.:||:...::::...::  ..:||..:.:...|..|:||:.|. ...||..||.
Zfish    71 EMTTVYLGRKPAMVLNTLQVIKEAIVQNGTSSSGRPSIPILTWITEGYGIVLATFGHSWRQQRRF 135

  Fly   144 TIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDL 208
            .:..|:..|:.::..|.|...|....  |.|.::|   |.|     ..:|..|:.:::.|||..:
Zfish   136 ALHTLRNFGLGKKSVEERVTEESGYL--VPEMLKL---EGK-----PFDPQHAIQNAVSNIICSI 190

  Fly   209 VFGITYKRDDPDWLYLQRLQEEGVKLIG--VSGVVNFLPWLRHLPANVRNIRFLLEGKAKTHAIY 271
            |||..::.|:..:.||..:.:|.:...|  :..|.|.:|.::|.|.                   
Zfish   191 VFGDRFEYDNKRFEYLLEIIKENINQAGSLIGQVFNLIPIIKHFPG------------------- 236

  Fly   272 DRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYE 336
                        ..||:::..:|.|...|:..|.   ..:..||          |...|..|.| 
Zfish   237 ------------PHQKIYQNAEELKSFIRESTKS---HRETLDP----------DSPRDFIDAY- 275

  Fly   337 PECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLH-ELL 400
               :||........||..: :|.:...:||||.||.||:..|:||.|:||.:....|.|.| |::
Zfish   276 ---LLEMEKQKSSQDSSFH-EDNMVMSVADLFLAGSDTTATTIRWGLIYLTQNPDVQERCHEEIV 336

  Fly   401 LPLGPS--PTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWA 463
            ..||..  |.:::.:.|.|..|.:.|..|..::||..:||...:...:..|.|..|:.::.:...
Zfish   337 RVLGYDRLPCMDDRDRLPYTLATVHELQRCGNIVPSSVPHETTQPMKLRGYDIPQGTQMLINLSD 401

  Fly   464 IHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHL 528
            |..:...:..|:.|.||.||...|.:..|..|:|||.|.|:|.||.:|:..|.||...:|:|...
Zfish   402 ILANKEHWKHPDTFNPENFLDDKGHFYRPEAFLPFSLGPRVCLGETLAKTELFLFITSLLQRIRF 466

  Fly   529 ELPSGTE-VDMAGESGITLTPTP 550
            ..|:|.: .:|.|...:..:|.|
Zfish   467 SWPTGEKWPNMDGIVSVVRSPEP 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 140/513 (27%)
cyp2aa12NP_001103171.2 p450 40..493 CDD:278495 140/513 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.