DRSC/TRiP Functional Genomics Resources

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Protein Alignment phm and cyp2d6

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001015719.1 Gene:cyp2d6 / 548436 XenbaseID:XB-GENE-855872 Length:505 Species:Xenopus tropicalis


Alignment Length:531 Identity:139/531 - (26%)
Similarity:240/531 - (45%) Gaps:79/531 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SVQSLSILLVPGALVLVILYLCERQ--CNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAK 78
            :|.:|.|:.   .|:|::|...:|:  |.|.    ||.|...||:|.|..:|.|..|.|.::|:|
 Frog    15 NVFTLGIIF---TLLLLLLDFMKRRKPCTDF----PPSPPSWPFVGNLLQMDFRDLHNSFKQLSK 72

  Fly    79 RYGGIFELKMGRVPTVVLSDAALVRD-FFRRDVMTGRAPLYLTHGIMGGFG-----IICAQEDIW 137
            :||.:..|::...|||||:...:::: ..::...|...|.:..:.|:|..|     ::......|
 Frog    73 QYGDVMSLRVFWKPTVVLNGFEVIKEALIQKSEDTADRPPFNLYEILGFVGNNKAVVLANYGQSW 137

  Fly   138 RHARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLG 202
            :..||.|:..|:..||.::..|.|.|         ||...|.|....:. ....:|...::.::.
 Frog   138 KDLRRFTLSTLRDFGMGKKSLEERVR---------DEAGYLCDAFQSEQ-GGPFDPHVLINTAVS 192

  Fly   203 NIINDLVFGITYKRDDPDWLYLQRLQEEGVKLIG--VSGVVNFLPWLRHLPANVRNIRFLLEGKA 265
            |:|..::||..::.||..:|.|..|.||.:|...  |..:::.|||...:|...|     |..:.
 Frog   193 NVICSIIFGERFEYDDHKFLKLLCLIEESIKAESGPVPQIISSLPWSSKVPGLAR-----LFFQP 252

  Fly   266 KTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESD 330
            :.|.:         |.|:|.....|:..:....:..::...|...|..                 
 Frog   253 RIHML---------QYLQEIINEHKQTWDSGHTRDFIDAFMLEMKKAK----------------- 291

  Fly   331 EEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRR 395
                           .|:|::   :.|..|....||||.||.:|:..||||.||::......||:
 Frog   292 ---------------GVKDSN---FNDQNLLLTTADLFSAGSETTTTTLRWGLLFMLLYPDVQRK 338

  Fly   396 LHE---LLLPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMI 457
            :.|   .::.....||:.::..:.|..|.|.|..|...::||.:||....:..:..:||..|::|
 Frog   339 VQEEIDQVIGRTRKPTMGDVLQMPYTNAVIHEIQRYADIIPLSVPHMAYRDTHIKGFFIPKGTVI 403

  Fly   458 VCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRI 522
            :.:..::..|...:.:|.:|.||.||..||.:.....|:.||:|.|:|.||::|||.|.||...:
 Frog   404 MTNLSSVLKDEKVWEKPFQFYPEHFLDRDGKFVKREAFMAFSAGRRVCLGEQLARMELFLFFTSL 468

  Fly   523 LRRFHLELPSG 533
            |:||..::|.|
 Frog   469 LQRFSFQIPDG 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 130/496 (26%)
cyp2d6NP_001015719.1 p450 52..501 CDD:306555 125/487 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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