DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2w1

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001153737.1 Gene:Cyp2w1 / 545817 MGIID:3616076 Length:493 Species:Mus musculus


Alignment Length:552 Identity:144/552 - (26%)
Similarity:239/552 - (43%) Gaps:83/552 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SLSILLVPGALVLVILYLCERQCN---DLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRY 80
            :|.:|.|.|.|:|:.|:...:.|.   .|....||||..|||||.|..|......::|.:|::||
Mouse     2 ALLLLGVWGILLLLGLWGLLQGCTRSPSLAPRWPPGPRPLPFLGNLHLLGVTQQDRALMELSERY 66

  Fly    81 GGIFELKMGRVPTVVLSDAALVRDFFRRDVMTG-----RAPLYLTHGIMGGFGIICAQEDIWRHA 140
            |.:|.:.:|...|||||...:||:..   |.||     |.|:.:...|..|.||..:....||..
Mouse    67 GPMFTIHLGSQKTVVLSGYEVVREAL---VGTGHELADRPPIPIFQHIQRGGGIFFSSGARWRAG 128

  Fly   141 RRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNII 205
            |:.|:..|::||: ::| .:..::.:.:|     |::    ....|...:..||..|..:..||.
Mouse   129 RQFTVRTLQSLGV-QQP-SMVGKVLQELA-----CLK----GQLDSYGGQPLPLALLGWAPCNIT 182

  Fly   206 NDLVFGITYKRDDPDWLYLQRLQEEGVKLIGVSGV--VNFLPWLRHLPANVRNIRFLLEGKAKTH 268
            ..|:||..:...||.::.|..|.::.:.|:|..|:  .|..|.|                     
Mouse   183 FTLLFGQRFDYQDPVFVSLLSLIDQVMVLLGSPGIQLFNTFPRL--------------------- 226

  Fly   269 AIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEA-DEDDEESDEE 332
                      |..|:..:.|..:::|.:.:.|.|.:.:........|:|...|| .:..:|.|.|
Mouse   227 ----------GAFLRLHRPVLSKIEEVRTILRTLLETRRPPLPTGGPAQSYVEALLQQGQEDDPE 281

  Fly   333 DTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLH 397
            |.:....:|...|                    |:..||.:|:.|||:|.:..:.:....|.|:.
Mouse   282 DMFGEANVLACTL--------------------DMVMAGTETTAATLQWAVFLMVKHPHVQGRVQ 326

  Fly   398 ELL-LPLGPS--PTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVC 459
            |.| ..|||.  |..|....|.|..|.:.|..|..:::| .:|.....:..:|.|.:..|:.::.
Mouse   327 EELDRVLGPGQLPQPEHQRALPYTSAVLHEVQRYITLLP-HVPRCTAADIQLGGYLLPKGTPVIP 390

  Fly   460 SEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILR 524
            ...::.:|...:..|.:|.|..||.|.|.:.....|:|||:|.|:|.|:.:||..|.|....:|:
Mouse   391 LLTSVLLDKTQWETPSQFNPNHFLDAKGRFMKRGAFLPFSAGRRVCVGKSLARTELFLLFAGLLQ 455

  Fly   525 RFHLELPSG---TEVDMAGESGITLTPTPHML 553
            |:.|..|.|   .::|:......|:.|....|
Mouse   456 RYRLLPPPGLSPADLDLRPAPAFTMRPPAQTL 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 135/519 (26%)
Cyp2w1NP_001153737.1 p450 35..489 CDD:278495 135/519 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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