DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and cyp2x6

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001013583.1 Gene:cyp2x6 / 541440 ZFINID:ZDB-GENE-050320-144 Length:491 Species:Danio rerio


Alignment Length:561 Identity:142/561 - (25%)
Similarity:235/561 - (41%) Gaps:94/561 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIFE 85
            |:|:|...|::..|...::..|.     ||||..:|..|.|..|:...|.|..:|.|::||.||.
Zfish     5 SLLVVICILLIFFLIRVKKPKNF-----PPGPPPVPIFGSLLQLNLANPLKDFEKFAEKYGEIFS 64

  Fly    86 LKMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQ-EDIWRHARRETIDW 147
            |..|..|.|:|:..|::::..  :....:||...::........||:.|. ..:.:..||..:..
Zfish    65 LYTGSRPAVILNSFAVIKEALVTKAQDFSGRPQDFMISHATENKGIVLADYGPVLKGHRRFALMT 129

  Fly   148 LKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGI 212
            ::..|:.::      .:|.||...:...|...|    |:....|:|....|:...|:|:.|:||.
Zfish   130 MRNFGLGKQ------SMEERILGEISHVVDYLD----KNAGKRVDPHIMFHNVASNVISLLLFGC 184

  Fly   213 TYKRDDPDWL--YLQRLQEEGVKLIGVSGVVNFLPWLRHLPANVRNIRFLLEGKAKTHAIYD--- 272
            .:..:. ::|  |:|.:.|       :|.::|. ||                     :.|||   
Zfish   185 RFDYNS-EFLQCYIQLINE-------ISKIING-PW---------------------NMIYDTFP 219

  Fly   273 --RIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTY 335
              ||:....::..:..||.|.: ..|.:                           ||........
Zfish   220 LLRILPLPFKKAFDHVKVIKSM-NLKLI---------------------------DEHKSTRVPG 256

  Fly   336 EPECILEHFLAVRDTDS---QLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAR----EQRCQ 393
            ||...::.:|...|...   ..:.:|:|...:.||..||.||...||....|||..    :.:||
Zfish   257 EPRDFIDCYLDELDKGKNCVSTFSEDKLLMSIMDLHFAGTDTISNTLLTAFLYLMNHPEVQVKCQ 321

  Fly   394 RRLHELLLPLGPSPTL-EELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMI 457
            :.:.::|  .|....: |:...:.|..|.|.|..|:.:.|||.:.|....:..:..|.|..|::|
Zfish   322 QEIDDVL--EGKDRVMYEDRHNMPYTLAVIHEVQRVANTVPLSVFHSTTRDTELMGYSIPKGTII 384

  Fly   458 VCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRI 522
            :.:...:..:...:..|.||.|..||...|.::.|..|||||:|.|||.||.:|||.|.|....:
Zfish   385 IPNLTRVLKEEGQWKFPYEFNPANFLNEQGQFEKPEAFIPFSTGLRMCLGEGLARMELFLIFVAL 449

  Fly   523 LRRFHLELP-SGTEVDMAGESGITLTPTPHMLRFTKLPAVE 562
            ||||..|.| ...:.|.....|:||||.|:.:...:...|:
Zfish   450 LRRFQFEWPVDAGKPDYTPVFGLTLTPKPYRMHIRRRETVK 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 135/524 (26%)
cyp2x6NP_001013583.1 p450 36..479 CDD:278495 129/512 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.000

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