DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phtm and Cyp2j16

DIOPT Version :10

Sequence 1:NP_573319.1 Gene:phtm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:XP_578474.1 Gene:Cyp2j16 / 502969 RGDID:1561242 Length:503 Species:Rattus norvegicus


Alignment Length:549 Identity:134/549 - (24%)
Similarity:240/549 - (43%) Gaps:86/549 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSL--QKLAKRYGGI 83
            ::||.....:|:..||..|:.|:.    |||||.|||:|.|...|....|..|  |:..|:||.:
  Rat    20 TLLLTLLTFLLLADYLKNRRPNNY----PPGPWRLPFVGNLFQFDLNISHLHLRIQQFVKKYGNL 80

  Fly    84 FELKMGRVPTVVLSDAALVRD--------FFRRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHA 140
            ..|..|.:..||::...|:::        |.:|.::..|..::..:      ||..|....|:..
  Rat    81 ISLDFGNISVVVITGLPLIKEALINNEQNFLKRPIVPSRYRVFKDN------GIFFANVHKWKEQ 139

  Fly   141 RRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNII 205
            ||..:..||..|:.::      .||:.|.......|.:...|.    ....:|...:::::.|||
  Rat   140 RRFALTMLKNFGLGKK------SLEQCIQEEAHHLVEVIGEEK----GQPFDPHFRINNAVSNII 194

  Fly   206 NDLVFGITYKRDDPDWLYLQRLQEEGV--KLIGVSGVVNFLPWL-RHLPANVRNIRFLLEGKAKT 267
            ..:.||..::.||..:..|.:|.:|.:  :....|.:.|..|.: ::||.               
  Rat   195 CSITFGERFEYDDSQFQELLKLADEVICSEASMTSVLYNVFPLIFKYLPG--------------- 244

  Fly   268 HAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEE 332
                            ..|.|||..::.|.:...:..   |..|:.:|          ||..|..
  Rat   245 ----------------PHQTVFKNWEKLKSIVANMID---RHRKDWNP----------DEPRDFV 280

  Fly   333 DTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLH 397
            |.:     |.......|..:..:.::.|.....|||.||.:|:..||||.|||:......|.::|
  Rat   281 DAF-----LTEMTKYPDKTTTSFNEENLIATTLDLFFAGTETTSTTLRWALLYITLNPEVQEKVH 340

  Fly   398 ---ELLLPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVC 459
               :.::..|..|:.::.:.:.|..|.|.|.:|:.:::||.:|.....:..:..:.:..|.||:.
  Rat   341 SEIDRVIGHGRLPSTDDQDAMPYTNAVIHEVLRMGNIIPLNVPREVTADSTLAGFHLPKGKMILT 405

  Fly   460 SEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILR 524
            :..|:|.||..:..|:.|.||.|| .:|.::....|:|||.|.|.||||::|:..|.:|...:::
  Rat   406 NLTALHRDPKEWATPDTFNPEHFL-ENGQFKKRDSFLPFSVGKRACPGEKLAKSELFIFFTALMQ 469

  Fly   525 RFHLELPSGTEVDMAGESGITLTPTPHML 553
            .|..:.|:..::.:....|::|.|..:.:
  Rat   470 NFTFKAPTNEKLSLKLRKGLSLYPVSYRI 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phtmNP_573319.1 CYP306A1-like 81..553 CDD:410745 111/485 (23%)
Cyp2j16XP_578474.1 cytochrome_P450 77..498 CDD:477761 112/486 (23%)

Return to query results.
Submit another query.