DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2j16

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:XP_578474.1 Gene:Cyp2j16 / 502969 RGDID:1561242 Length:503 Species:Rattus norvegicus


Alignment Length:549 Identity:134/549 - (24%)
Similarity:240/549 - (43%) Gaps:86/549 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSL--QKLAKRYGGI 83
            ::||.....:|:..||..|:.|:.    |||||.|||:|.|...|....|..|  |:..|:||.:
  Rat    20 TLLLTLLTFLLLADYLKNRRPNNY----PPGPWRLPFVGNLFQFDLNISHLHLRIQQFVKKYGNL 80

  Fly    84 FELKMGRVPTVVLSDAALVRD--------FFRRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHA 140
            ..|..|.:..||::...|:::        |.:|.::..|..::..:      ||..|....|:..
  Rat    81 ISLDFGNISVVVITGLPLIKEALINNEQNFLKRPIVPSRYRVFKDN------GIFFANVHKWKEQ 139

  Fly   141 RRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNII 205
            ||..:..||..|:.::      .||:.|.......|.:...|.    ....:|...:::::.|||
  Rat   140 RRFALTMLKNFGLGKK------SLEQCIQEEAHHLVEVIGEEK----GQPFDPHFRINNAVSNII 194

  Fly   206 NDLVFGITYKRDDPDWLYLQRLQEEGV--KLIGVSGVVNFLPWL-RHLPANVRNIRFLLEGKAKT 267
            ..:.||..::.||..:..|.:|.:|.:  :....|.:.|..|.: ::||.               
  Rat   195 CSITFGERFEYDDSQFQELLKLADEVICSEASMTSVLYNVFPLIFKYLPG--------------- 244

  Fly   268 HAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEE 332
                            ..|.|||..::.|.:...:..   |..|:.:|          ||..|..
  Rat   245 ----------------PHQTVFKNWEKLKSIVANMID---RHRKDWNP----------DEPRDFV 280

  Fly   333 DTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLH 397
            |.:     |.......|..:..:.::.|.....|||.||.:|:..||||.|||:......|.::|
  Rat   281 DAF-----LTEMTKYPDKTTTSFNEENLIATTLDLFFAGTETTSTTLRWALLYITLNPEVQEKVH 340

  Fly   398 ---ELLLPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVC 459
               :.::..|..|:.::.:.:.|..|.|.|.:|:.:::||.:|.....:..:..:.:..|.||:.
  Rat   341 SEIDRVIGHGRLPSTDDQDAMPYTNAVIHEVLRMGNIIPLNVPREVTADSTLAGFHLPKGKMILT 405

  Fly   460 SEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILR 524
            :..|:|.||..:..|:.|.||.|| .:|.::....|:|||.|.|.||||::|:..|.:|...:::
  Rat   406 NLTALHRDPKEWATPDTFNPEHFL-ENGQFKKRDSFLPFSVGKRACPGEKLAKSELFIFFTALMQ 469

  Fly   525 RFHLELPSGTEVDMAGESGITLTPTPHML 553
            .|..:.|:..::.:....|::|.|..:.:
  Rat   470 NFTFKAPTNEKLSLKLRKGLSLYPVSYRI 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 127/521 (24%)
Cyp2j16XP_578474.1 p450 44..499 CDD:278495 127/521 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.