DRSC/TRiP Functional Genomics Resources

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Protein Alignment phtm and Cyp2c24

DIOPT Version :10

Sequence 1:NP_573319.1 Gene:phtm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001258283.1 Gene:Cyp2c24 / 499353 RGDID:1563697 Length:490 Species:Rattus norvegicus


Alignment Length:556 Identity:142/556 - (25%)
Similarity:238/556 - (42%) Gaps:96/556 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIF 84
            |.::|....|:|:.|:   ||.:. .|..||||..||.:|.:..:|.:...||....:|.||.:|
  Rat     5 LVLVLTLSCLLLLSLW---RQSSG-RGKLPPGPTPLPIIGNILQIDVKDISKSFTNFSKIYGPVF 65

  Fly    85 ELKMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDW 147
            .|..|..||||:.....|::..  ..:..:||....:...:..|.|:|.:....|:..|..::..
  Rat    66 TLYFGPKPTVVVHGYEAVKEALDDLGEEFSGRGSFPIVERMNNGLGVIFSNGTKWKELRHFSLMT 130

  Fly   148 LKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGI 212
            |:..||.:|      .:|.||.   :|...|.: |.:|:..|..:|...|..:..|:|..:||..
  Rat   131 LRNFGMGKR------SIEDRIQ---EEASCLVE-ELRKTNGSLCDPTFILSCAPSNVICSVVFHN 185

  Fly   213 TYKRDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLR---HLPANVRNIRFLLEGKAKTHAIYDRI 274
            .:...|.::|.|.....|..|::.       .||::   .|||.:.    .|.|.      ::|:
  Rat   186 RFDYKDENFLNLMEKLNENFKILN-------SPWMQVCNALPAFID----YLPGS------HNRV 233

  Fly   275 VEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESD------EED 333
            :           |.|.|::..          .||:.||   .||..:.|...:..|      |::
  Rat   234 I-----------KNFAEIKSY----------ILRRVKE---HQETLDMDNPRDFIDCFLIKMEQE 274

  Fly   334 TYEP--ECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRL 396
            .:.|  |..:|..:|.                ::|:|.||.:|:..|||:.||.|.:......::
  Rat   275 KHNPRTEFTIESLMAT----------------VSDVFVAGSETTSTTLRYGLLLLLKHTEVTAKV 323

  Fly   397 HELL---LPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIV 458
            .|.:   :.....|.:::...:.|..|.:.|..|..:::|..:||....|....:|.|..|:.:|
  Rat   324 QEEIDHVIGRHRRPCMQDRTRMPYTDAMVHEIQRYINLIPNNVPHAATCNVRFRNYVIPKGTDLV 388

  Fly   459 CSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRIL 523
            .|..::..|...||.||.|.|..||..:|.::....|:|||:|.|||.||.:|||.|.|....|:
  Rat   389 TSLTSVLHDDKEFPNPEVFDPGHFLDENGNFKKSDYFMPFSTGKRMCVGEALARMELFLLLTTIV 453

  Fly   524 RRFHLELPSGTEVDMAGESGITLTPTPHMLRFTKLP 559
            :.|:|:....|:         .:..||....|.::|
  Rat   454 QNFNLKSFVDTK---------DIDTTPMANTFGRVP 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phtmNP_573319.1 CYP306A1-like 81..553 CDD:410745 120/487 (25%)
Cyp2c24NP_001258283.1 CYP2C-like 61..485 CDD:410758 123/496 (25%)

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