DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and cyp2v1

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001009890.1 Gene:cyp2v1 / 494153 ZFINID:ZDB-GENE-040912-139 Length:504 Species:Danio rerio


Alignment Length:541 Identity:146/541 - (26%)
Similarity:239/541 - (44%) Gaps:73/541 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LVLVILYLCE----RQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIFELKMG 89
            |:|.||:|..    |..|......||||..|||:|.:..||...||..|.|::..||.||.|::|
Zfish    22 LLLFILFLLVSVKLRNRNKPHKNLPPGPTPLPFIGNVFNLDTSQPHIDLTKMSDHYGNIFSLRLG 86

  Fly    90 RVPTVVLSDAALVRDFFRRDVMTGRAPLY-----LTHGIMGGFGIICAQEDIWRHARRETIDWLK 149
            .:.|||::..::|:......   |.:.:|     :|..|....|:.......|:..||.|:..||
Zfish    87 SLNTVVVNTYSMVKKVLNDQ---GNSFMYRPVNDITERISKCQGLTFNNGYSWKQHRRFTLSTLK 148

  Fly   150 ALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGITY 214
            ..|:.:|..|.....|.:...     ..:.||.     ....||...:::.:.|||..:|||..:
Zfish   149 FFGVGKRSLEFIIMEEYKFLH-----QSIMDTN-----GLPFNPHYIINNGVSNIICSMVFGRRF 203

  Fly   215 KRDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLRHLPANVRNIRFLLEGKAKTHAIYDRIVEACG 279
            :..|..:|.:..|..:.:||                    :...|:     :.:|.:.|:::...
Zfish   204 EYTDQRFLNMLSLISKALKL--------------------QTSVFI-----QLYAAFPRLMDLLP 243

  Fly   280 QRLKEKQKVFKELQEQKRLQRQLEKEQL-RQSKEADPSQEQSEADEDDEESDEEDTYEPECILEH 343
            ...||....|.::       |...||:: :...:.|||..:...|               |.|..
Zfish   244 GPHKELFSCFHQV-------RAFIKEEVDKHRADWDPSSPRDFID---------------CYLTE 286

  Fly   344 FLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLH-ELLLPLG--P 405
            ....:|.....:.|:.|::.:.|||.||.:|:..||.|..:|:.:....|.::. |:...:|  .
Zfish   287 IEKKKDDLEAGFHDEGLQYAVLDLFVAGTETTSTTLLWAFVYMMKYPEIQEKVQAEIDKVVGRYR 351

  Fly   406 SPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDPVA 470
            .|::::...:.|..|.|.|..|:.:||||.:|....|:.::..|||..|:.|:.:..::..|...
Zfish   352 RPSMDDRPCMPYTDAVIHEIQRMGNVVPLSVPRMTNEDTILEGYFIPKGTQIIPNLTSVLFDQTK 416

  Fly   471 FPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLELPSGTE 535
            :.....|.|:.||.|.|.::.|..|||||.|.|.||||.:|||.|.||....|:.|.|..|..|:
Zfish   417 WKTQHSFDPQNFLNAQGKFEKPEAFIPFSLGKRSCPGESLARMELFLFFTSFLQSFSLSAPDETQ 481

  Fly   536 VDMAGESGITLTPTPHMLRFT 556
            ..:..:.|:||:|.|..:.||
Zfish   482 TSLDFKFGMTLSPKPFKICFT 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 137/514 (27%)
cyp2v1NP_001009890.1 p450 46..501 CDD:278495 137/514 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.910

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