DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and cyp2k16

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001005963.2 Gene:cyp2k16 / 449790 ZFINID:ZDB-GENE-041010-37 Length:502 Species:Danio rerio


Alignment Length:553 Identity:157/553 - (28%)
Similarity:244/553 - (44%) Gaps:82/553 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VQSLSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYG 81
            |.|...|:....|:||...|..|..:|  ...||||..||.||.|..||...||.||.::||::|
Zfish    10 VSSTGTLICFLLLLLVAYLLFLRSQSD--ENEPPGPKPLPLLGNLLMLDVNKPHLSLCEMAKQFG 72

  Fly    82 GIFELKMGRVPTVVLSDAALVRD--------FFRRDVMTGRAPLYLTHGIMGGFGIICAQEDIWR 138
            .:|::..|....|||:....|:.        |..|::|    ||:  |....|.|||.|..:.||
Zfish    73 PVFKVYFGPKKVVVLAGYKAVKQALVNYAEAFGDREIM----PLF--HDFTKGHGIIFANGESWR 131

  Fly   139 HARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGN 203
            ..||..:..|:..||.::      ::|.:|   ::|...|.: |.:|...........::::..:
Zfish   132 EMRRFALTNLRDFGMGKK------KIEEKI---IEETCHLRE-EFEKFEGKPFETAQLMNYAASS 186

  Fly   204 IINDLVFGITYKRDDPDWLYLQRLQEEGVKLIGVSGV--VNFLPWLRHLPANVRNIRFLLEGKAK 266
            :|:.:|:|..::..||....:.....|.|:|.|.:.|  .|..|:|..|..|.|           
Zfish   187 VISSIVYGRRFEYTDPQLRTMVDRANESVRLSGSASVQLYNMFPFLGPLLKNWR----------- 240

  Fly   267 THAIYDRIVEACGQRLKEKQKVFKELQE-QKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESD 330
                         |.:|......:|:.| ...|.:.|..:.||...::...::|..     |:|.
Zfish   241 -------------QLMKNLHLDIEEISELVNGLHQTLNHQDLRGFVDSFLVRKQYA-----EDSG 287

  Fly   331 EEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRR 395
            |:|::                   :.:..|.:.:.:||.||.||:..||||.||.:|:....|.|
Zfish   288 EKDSH-------------------FHEQNLIYTVGNLFVAGTDTTSTTLRWSLLLMAKYPHIQDR 333

  Fly   396 LHELLLPL--GPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIV 458
            :.|.:..:  |..|..|:.:.|.|..|.|.||.|:.::||:.|||....:.....||||.|:.|.
Zfish   334 VQEEIDQVIGGRQPVSEDRKNLPYTDAVIHETQRLANIVPMSIPHMTSSDITFNGYFIKKGTCIF 398

  Fly   459 CSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRIL 523
            ....::..|...:..|..|.|..||...|.:.....|:|||:|.|:|.||.:|||.|.||...:|
Zfish   399 PLLTSVLWDEDEWETPHIFNPNHFLDEQGRFVKRDAFMPFSAGRRICLGESLARMELFLFFTSLL 463

  Fly   524 RRFHLELPSGT---EVDMAGESGITLTPTPHML 553
            :.|....|.|.   |:::....|.||.|..|.|
Zfish   464 QYFRFTPPPGVSEDELELTPAVGFTLNPIAHKL 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 148/521 (28%)
cyp2k16NP_001005963.2 p450 58..497 CDD:278495 137/503 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.000

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