DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and cyp2c8.2

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001005711.1 Gene:cyp2c8.2 / 448236 XenbaseID:XB-GENE-5852312 Length:495 Species:Xenopus tropicalis


Alignment Length:525 Identity:137/525 - (26%)
Similarity:232/525 - (44%) Gaps:67/525 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VQSLSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYG 81
            ::.|:|.|   .|.:.:|.|...:.:......||||:.||.||.: .......:.|.:||:::||
 Frog     1 MEPLTIFL---CLFIFLLLLFTWKTHKRRVQLPPGPYPLPLLGNV-LQGITVLYDSYRKLSEQYG 61

  Fly    82 GIFELKMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRET 144
            .:|.:.:|..|.|||....:::|..  .......|....:...:..|:|:|......|:..||.:
 Frog    62 PVFTVWLGSTPMVVLCGYEVLKDALINHSQEFGARGAFPVPERLTDGYGVISTNGTRWQQLRRFS 126

  Fly   145 IDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEV-NPLPALHHSLGNIINDL 208
            :..|:..||.:|      .:|.||.......:     :|.:....|. :||..|..::.||||.:
 Frog   127 VTVLRNFGMGKR------SMEERIHEETQHLI-----QAVQHTGGEAFDPLYLLGRAVNNIINLI 180

  Fly   209 VFGITYKRDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLRHLPANVRNIRFLLEGKAKTHAIYDR 273
            |||   :|    |.|..::.   :||..:  :.:.|.:||. |..|               ||..
 Frog   181 VFG---RR----WDYKDKMM---IKLFNI--INSILLFLRS-PLGV---------------IYSA 217

  Fly   274 IVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPE 338
            :.:.........||:|.:.:..|...|    ||:...||.             .:||....| .:
 Frog   218 LYQIMQHLPGPHQKIFHDSETVKSFIR----EQINSHKET-------------LDSDSPRDY-ID 264

  Fly   339 CILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLH-ELLLP 402
            |.|......:|..|..:..:.|.:.:.|.|.||.:|:..|:::.||.:......|.::. |:...
 Frog   265 CFLIKANQEKDHHSSEFSQENLVNTVFDFFVAGTETATNTIQFSLLVIITYPHIQAQVQKEIDKV 329

  Fly   403 LGPS--PTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIH 465
            :||.  |.:.:...:.|..|.|.|..|...:|||.:||...::.|...:.|..|:.::....:..
 Frog   330 VGPDRLPGIADRAQMPYTNAVIHEIHRFLDLVPLSLPHMATQDTVCRGFRIPKGTTVIPLIGSAL 394

  Fly   466 MDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLEL 530
            .||..:..||||.||.||..:|.:..||.|:|||:|.|:|.||.:|||.:.||...:|::|.:.:
 Frog   395 CDPAHWETPEEFNPEHFLNQNGEFYIPPAFMPFSAGKRVCLGEGLARMEIFLFFTALLQKFTIRV 459

  Fly   531 PSGTE 535
            .:.|:
 Frog   460 ANQTD 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 131/493 (27%)
cyp2c8.2NP_001005711.1 p450 49..464 CDD:365848 122/471 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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