DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2c68

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001034644.2 Gene:Cyp2c68 / 433247 MGIID:3612287 Length:491 Species:Mus musculus


Alignment Length:569 Identity:139/569 - (24%)
Similarity:225/569 - (39%) Gaps:134/569 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VILYLC---------ERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIFELK 87
            |:|.||         .|| ....|..||||..||.:|....:|.:...:.|...:|.||.:|.|.
Mouse     5 VVLVLCLSFLLLLSLWRQ-RSARGNLPPGPTPLPIIGNYHLIDMKDIGQCLTNFSKIYGPVFTLY 68

  Fly    88 MGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDWLKA 150
            .|..|.|:|.....:::.|  ..:..:||..:.:...:..|.||..:..::|:..|..|::.|:.
Mouse    69 FGSQPIVILHGYEAMKEAFIDYGEEFSGRGRIPVFDKVSKGKGIGFSHGNVWKATRVFTVNTLRN 133

  Fly   151 LGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGITYK 215
            |||.:|..|.:          |.|..:....|.||:..|..:|...:..:..|:|..:||...:.
Mouse   134 LGMGKRTIETK----------VQEEAQWLMKELKKTNGSPCDPQFIIGCAPCNVICSIVFQNRFD 188

  Fly   216 RDDPDWLYLQRLQEEGVKLI---------GVSGVVNFLP-----------WLRHLPANVRNIRFL 260
            ..|.|:|.|.....|..:::         .|..::::.|           |::         .:|
Mouse   189 YKDKDFLSLIGKVNECTEILSSPECQIFNAVPILIDYCPGSHNKFLKNHTWIK---------SYL 244

  Fly   261 LEGKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADED 325
            || |.|.|                                                         
Mouse   245 LE-KIKEH--------------------------------------------------------- 251

  Fly   326 DEESDEEDTYEPECILEHFLAVRDTDSQL----YCDDQLRHLLADLFGAGVDTSLATLRWFLLYL 386
             |||  .|...|...:::||..|...:.:    |..:.|..|:.||...|.:|..:|:|:.||.|
Mouse   252 -EES--LDVTNPRDFVDYFLIQRRQKNGIEHMDYTIEHLATLVTDLVFGGTETLSSTMRFALLLL 313

  Fly   387 AREQRCQRRLHELL---LPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPH--GCKENFVV 446
            .:......::.|.:   :....||.:::...:.|..|.:.|..|...:.|.|:.|  .|...|  
Mouse   314 MKHTHITAKVQEEIDNVIGRHRSPCMQDRNHMPYTNAMVHEVQRYIDLGPNGVVHEVTCDTKF-- 376

  Fly   447 GDYFIKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMA 511
            .:|||..|:.::.|..::..|...||.||.|.|..||..:|.::....|:|||:|.|:|.||.:|
Mouse   377 RNYFIPKGTQVMTSLTSVLHDSTEFPNPEVFDPGHFLDDNGNFKKSDYFMPFSAGKRICVGESLA 441

  Fly   512 RMILTLFTGRILRRFHLE-LPSGTEVDMAGESGITLTPTPHMLRFTKLP 559
            ||.|.||...||:.|.|: |....::||          ||....|:|:|
Mouse   442 RMELFLFLTTILQNFKLKPLVDPKDIDM----------TPKHSGFSKIP 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 129/537 (24%)
Cyp2c68NP_001034644.2 p450 30..487 CDD:278495 132/543 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.000

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