DRSC/TRiP Functional Genomics Resources

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Protein Alignment phm and Cyp2c54

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_996260.1 Gene:Cyp2c54 / 404195 MGIID:3642960 Length:490 Species:Mus musculus


Alignment Length:552 Identity:149/552 - (26%)
Similarity:235/552 - (42%) Gaps:97/552 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LVLVILYLC------ERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIFELK 87
            ||||:...|      .||..: .|..||||..||.:|.:..:|.:...:|...|::.||.::.|.
Mouse     5 LVLVLTLSCLFLLSLWRQSYE-RGKLPPGPTPLPIIGNILQIDVKDICQSFTNLSRVYGPVYTLY 68

  Fly    88 MGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDWLKA 150
            :||.|||||.....|::..  ..||..||..|.:......|.||..:...:|::.|..::..|:.
Mouse    69 LGRKPTVVLHGYEAVKEALVDHGDVFAGRGRLPVFDKATNGMGIGFSNGSVWKNTRHFSLMTLRN 133

  Fly   151 LGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGITYK 215
            |||.:|..|.|          |.|..|....|.:|:..|..:|...|..:..|:|..::|...:.
Mouse   134 LGMGKRSIEDR----------VQEEARCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQDRFD 188

  Fly   216 RDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLR---HLPANVRNIRFLLEGKAKTHAIYDRIVEA 277
            ..|.|:|.|....:|..|::..       |||:   ..||       ||:....:|         
Mouse   189 YKDRDFLNLLEKLDEISKILST-------PWLQVCNTFPA-------LLDYCPGSH--------- 230

  Fly   278 CGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPECILE 342
                    .:.||.....|..  .|||  :|:.||:                  .|...|...::
Mouse   231 --------NQFFKNYAYIKNF--LLEK--IREHKES------------------LDVTIPRDFID 265

  Fly   343 HFL---AVRDTDSQLYCDDQLRHL---LADLFGAGVDTSLATLRWFLLYLAREQRCQRRLHELL- 400
            :||   |..|.:..|  .:...||   :.|||..|.::...|||:.||.|.:......::.|.: 
Mouse   266 YFLIKGAQEDDNHPL--KNNFEHLAITVTDLFIGGTESMSTTLRYALLLLLKYPHVTAKVQEEIE 328

  Fly   401 --LPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWA 463
              :.....|.:::...:.|..|.|.|..|...:||..:||....:....:|||..|:.::.|..:
Mouse   329 HVIGKHRRPCMQDRSHMPYTNAMIHEVQRFIDLVPNNLPHEVTCDIKFRNYFIPKGTTVITSLSS 393

  Fly   464 IHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHL 528
            :..|...||.||:|.|..||..:|.::....|:|||:|.|:|.||.:|||.|.||...||:.|:|
Mouse   394 VLRDSKEFPNPEKFDPGHFLDENGKFKKSDYFMPFSTGKRICAGEGLARMELFLFLTSILQNFNL 458

  Fly   529 E-LPSGTEVDMAGESGITLTPTPHMLRFTKLP 559
            : |....::|:          ||.::....:|
Mouse   459 KPLVHPKDIDI----------TPMLIGLGSVP 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 140/520 (27%)
Cyp2c54NP_996260.1 p450 30..487 CDD:278495 141/526 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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