DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and cyp2x7

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001243106.1 Gene:cyp2x7 / 402847 ZFINID:ZDB-GENE-110114-2 Length:491 Species:Danio rerio


Alignment Length:562 Identity:145/562 - (25%)
Similarity:244/562 - (43%) Gaps:94/562 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLVPGALVLVILYL------CERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYG 81
            :|....|:|:.::|      .:|..|.     ||||..:|..|.|..::...|.|..::||::||
Zfish     1 MLEVSVLILICIFLVFFLIRIKRPKNF-----PPGPPPVPIFGNLLQINMVDPLKEFERLAEKYG 60

  Fly    82 GIFELKMGRVPTVVLSDAALVRDFF--RRDVMTGR-APLYLTHGIMGGFGIICAQ-EDIWRHARR 142
            .||.|..|..|.|.|::..::::..  :....:|| ..|.::| :.|..|::.|. ..:|:..||
Zfish    61 NIFSLYTGSKPAVFLNNFEVIKEALVTKAQDFSGRPQDLMISH-LTGNKGVVLADYGPLWKDHRR 124

  Fly   143 ETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIIND 207
            ..:..|:..|:.::      .:|.||...:...|...|    |:....|:|....|:...|:||.
Zfish   125 FALMTLRNFGLGKQ------SMEERILGEISHIVDFLD----KNTGKTVDPQIMFHNIASNVINL 179

  Fly   208 LVFGITYKRDDPDWL--YLQRLQEEGVKLIGVSGVVNFL----PWLRHLPANVRNIRFLLEGKAK 266
            ::||..:..:: ::|  |:||:.|   .|..::|..|.:    |.||.||...:           
Zfish   180 VLFGCRFDYNN-EFLRGYIQRIAE---NLRILNGPWNMIYDTFPLLRILPLPFK----------- 229

  Fly   267 THAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDE 331
                                |.|..::..|.:.|:|..|   ......|.|.:...|        
Zfish   230 --------------------KAFDNVKIIKSMNRKLIDE---HKSTRVPGQPRDFID-------- 263

  Fly   332 EDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAR----EQRC 392
                   |.|:....|::..| .:.:|||...:.|:..||.||:..||....|||..    :.:|
Zfish   264 -------CYLDELDKVKNCVS-TFSEDQLIMNIMDMSFAGTDTTSNTLLAAFLYLMNHPEVQVKC 320

  Fly   393 QRRLHELLLPLGPSP-TLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSM 456
            |:.:.::|  .|... |.|:...:.|..|.|.|..|:.::|||.:.|....:..:..|.|..|::
Zfish   321 QQEIDDVL--EGKDQVTYEDRHNMPYTLAVIHEVQRVANIVPLSVLHCTTRDTELMGYSIPKGTV 383

  Fly   457 IVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGR 521
            |:.:...:..:...:..|.||.|..||...|.::.|..|||||:|.|:|.||.:|||.|.|....
Zfish   384 IIPNLTVVLKEEGQWKFPHEFNPANFLNEQGQFEKPEAFIPFSTGPRVCLGEGLARMELFLIFVT 448

  Fly   522 ILRRFHLELPSGT-EVDMAGESGITLTPTPHMLRFTKLPAVE 562
            :||||....|... :.|.....|:|:||.|:.:...:...|:
Zfish   449 LLRRFQFVWPEDAGKPDYTPVFGLTMTPKPYRMHIRRRDTVK 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 138/521 (26%)
cyp2x7NP_001243106.1 p450 36..479 CDD:278495 132/509 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.000

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