DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and cyp2p9

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_956914.1 Gene:cyp2p9 / 393592 ZFINID:ZDB-GENE-040120-2 Length:496 Species:Danio rerio


Alignment Length:539 Identity:140/539 - (25%)
Similarity:241/539 - (44%) Gaps:79/539 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VILYLCERQCNDLMG------AP---PPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIFELK 87
            ::::||...   |:|      ||   |||||.||.:|.|..:|....|....|.|:|||.||.|:
Zfish    15 ILIFLCVFL---LLGDYIKNKAPKNFPPGPWSLPIIGDLHHIDNSKIHLQFTKFAERYGNIFSLR 76

  Fly    88 MGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDWLKA 150
            :.....|||:...||::.:  :.|.:..|..|.|.:.|:|..||:.:....|:|.||..:..|:.
Zfish    77 LFGPRIVVLNGYNLVKEVYIKQGDNLADRPVLPLFYEIIGDKGIVLSSGYKWKHQRRFALSTLRN 141

  Fly   151 LGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGITYK 215
            .|:.::..|....|         ||..|.:..:.:. ....:|...|::::.|:|..||||..:.
Zfish   142 FGLGKKSLEPSINL---------ECGFLNEAISNEQ-GQPFDPRLLLNNAVSNVICVLVFGNRFD 196

  Fly   216 RDDPDWLYLQRLQEEGVKLIG--VSGVVNFLPWL-RHLPANVRNIRFLLEGKAKTHAIYDRIVEA 277
            ..|..:..|.:...|.:.|.|  .:.:.|..||| :.||.:.:          |...::.::::.
Zfish   197 YSDHHFQTLLKHINEAIYLEGGICAQLYNMFPWLMQRLPGSHK----------KVITLWKKVIDF 251

  Fly   278 CGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPECILE 342
            ..|::.|.:                        .:.||...:...|               |.|.
Zfish   252 IRQKVNEHR------------------------VDHDPLNPRDYID---------------CFLA 277

  Fly   343 HFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLHELL-LPLGPS 406
            ....::|..:..:..:.|.....|||.||.:|:..||.|.|||:.:....|.::.|.: ..:|.|
Zfish   278 EMDKLKDDTAAGFDVENLCICTLDLFVAGTETTSTTLYWGLLYMMKYPGIQAKVQEEIDRVVGGS 342

  Fly   407 --PTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDPV 469
              |::.:.:.:.|..|.|.|..|:.:::|:.:.....|:..:|.|.:..|:|:..:..::..|..
Zfish   343 RQPSVSDRDNMPYTNAVIHEIQRMGNIIPINVTRTTSEDIRIGKYSVPKGTMVTSNLTSVLFDES 407

  Fly   470 AFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLELPSGT 534
            .:..|..|.|..||.|:|.::....|:|||.|.|:|.||::|||.|.||...:|:||....|:|.
Zfish   408 EWETPHSFNPGHFLDAEGKFRRRDAFLPFSLGKRVCLGEQLARMELFLFFSSLLQRFTFSPPAGV 472

  Fly   535 EVDMAGESGITLTPTPHML 553
            |..:..:.|.|..|.|:.|
Zfish   473 EPSLDYKLGATHCPQPYQL 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 134/513 (26%)
cyp2p9NP_956914.1 p450 38..492 CDD:278495 134/513 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.