DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2d12

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_958748.1 Gene:Cyp2d12 / 380997 MGIID:88604 Length:504 Species:Mus musculus


Alignment Length:554 Identity:148/554 - (26%)
Similarity:231/554 - (41%) Gaps:90/554 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIFE 85
            |:.:.....:|::..:..||  ......||||...|.||.|..:|......||.||..|||.:|.
Mouse    11 SVAIFTVIFILLVDLMHRRQ--SWTSCYPPGPVPWPVLGNLLQVDLNNMPYSLYKLQNRYGDVFS 73

  Fly    86 LKMGRVPTVVLSDAALVRDFFRR--DVMTGRAPLYLTHGIMGGF-----GIICA-QEDIWRHARR 142
            |:|...|.||::....:::....  :....|.|:.:...:  ||     |:|.| ....||..||
Mouse    74 LQMAWKPMVVINRMKAMKEVLLTCGEDTADRPPVPIFEHL--GFKPRSQGMIFAPYGPEWREQRR 136

  Fly   143 ETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIIND 207
            .::..|:..|:.|:      .||..:.:........|.|:|    ...:||...|..:..|:|..
Mouse   137 FSLSSLRNFGLGRK------SLEEWVIKEAGHLCDAFTTQA----GQYINPNTMLKKATCNVIAS 191

  Fly   208 LVFGITYKRDDPDWLYLQR----LQEEGVKLIG-VSGVVNFLPWLRHLPANVRNIRFLLEGKAKT 267
            |:|...::.:||   ||.|    |::...:|.| :..|:|..|.|.|:|                
Mouse   192 LIFARRFEYEDP---YLIRMLKVLEDSLTELSGLIPEVINTFPILLHIP---------------- 237

  Fly   268 HAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEE 332
                         ||.:     |.||.||.....::..........||:|               
Mouse   238 -------------RLAD-----KFLQSQKSFIAIVDNLLTENRTTWDPAQ--------------- 269

  Fly   333 DTYEPECILEHFLA----VRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQ 393
               .|..:.:.|||    .:......:.|:.||.::.|||.||:.|:..||.|.||.:......|
Mouse   270 ---SPRNLTDAFLAEIEKAKGNPESSFNDENLRMVVIDLFTAGILTTSTTLSWALLLMILHPDVQ 331

  Fly   394 RRL-HELLLPLGP--SPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGS 455
            ||: .|:...:|.  .|.:.:...:.|..|.|.|..|...:|||.:|.....:..|.|:.|..|:
Mouse   332 RRVQQEIDEVIGQVRHPEMADQAHMPYTNAVIHEVQRFGDIVPLHLPRITSRDIEVQDFLIPKGT 396

  Fly   456 MIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTG 520
            :::.:..::|||...:.:|..|.||.||.|.|.:.....||.||:|.|.|.||.:|||.|.||..
Mouse   397 ILLPNMSSVHMDDTVWEKPLRFHPEHFLDAQGHFVKHEAFITFSAGRRSCLGEPLARMELFLFFT 461

  Fly   521 RILRRFHLELPSG-TEVDMAGESGITLTPTPHML 553
            .:|:||...:|.| .:........|.:.|:|:.|
Mouse   462 CLLQRFSFSVPDGQPQPSDHRVFSIMVAPSPYQL 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 144/526 (27%)
Cyp2d12NP_958748.1 p450 37..496 CDD:278495 144/526 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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