DRSC/TRiP Functional Genomics Resources

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Protein Alignment phtm and Cyp2j3

DIOPT Version :10

Sequence 1:NP_573319.1 Gene:phtm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_786942.1 Gene:Cyp2j3 / 313375 RGDID:631442 Length:502 Species:Rattus norvegicus


Alignment Length:563 Identity:139/563 - (24%)
Similarity:241/563 - (42%) Gaps:101/563 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 WMPSVQSLSILLVPGALVLVIL-YLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKL 76
            |  :|..|.|||:.....|.:. :|..|:..:.    |||||.||.:|.|..||.:.||.|||:.
  Rat    13 W--TVLHLRILLLAAVTFLFLADFLKHRRPKNY----PPGPWRLPLVGCLFHLDPKQPHLSLQQF 71

  Fly    77 AKRYGGIFELKMGRVPTVVLSDAALVRD--------FFRRDVMTGRAPLYLTHGIMGGFGIICAQ 133
            .|:||.:..|....:|:||::...|:::        |..|.|...|..|:..:|::...|     
  Rat    72 VKKYGNVLSLDFANIPSVVVTGMPLIKEIFTQMEHNFLNRPVTLLRKHLFNKNGLIFSSG----- 131

  Fly   134 EDIWRHARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALH 198
             ..|:..||..:..|:..|:.::      .||:||.   :|...|.:. .|.......:|...::
  Rat   132 -QTWKEQRRFALMTLRNFGLGKK------SLEQRIQ---EEAYHLVEA-IKDEGGLPFDPHFNIN 185

  Fly   199 HSLGNIINDLVFGITYKRDDPDWLYLQRLQEEGVKLIG--VSGVVNFLP-WLRHLP-------AN 253
            .::.|||..:.||..::..|..:..:.||.:|.:.|..  :..:.|..| .|::||       :|
  Rat   186 KAVSNIICSVTFGERFEYHDSQFQEMLRLLDEAMCLESSMMCQLYNIFPRILQYLPGSHQTLFSN 250

  Fly   254 VRNIRFLLEGKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQE 318
            .|.::..:....|.|                                         .::.||   
  Rat   251 WRKLKLFISDIIKNH-----------------------------------------RRDWDP--- 271

  Fly   319 QSEADEDDEESDEEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFL 383
                   ||..|..|.:     |:......|..:..:.::.|.....|||.||.:|:..||||.|
  Rat   272 -------DEPRDFIDAF-----LKEMAKYPDKTTTSFNEENLICSTLDLFFAGTETTSTTLRWAL 324

  Fly   384 LYLAREQRCQRRLH---ELLLPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFV 445
            |.:|.....|.::.   :.::..|..|.|.:.:.:.|..|.|.|..||.:::|..:|.....:..
  Rat   325 LCMALYPEVQEKMQAEIDRVIGQGRQPNLADRDSMPYTNAVIHEVQRIGNIIPFNVPREVAVDTY 389

  Fly   446 VGDYFIKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEM 510
            :..:.:..|:||:.:..|:|.||..:..|:.|.||.|| .:|.::....|:|||.|.|.|.||::
  Rat   390 LAGFNLPKGTMILTNLTALHRDPKEWATPDTFNPEHFL-ENGQFKKRESFLPFSMGKRACLGEQL 453

  Fly   511 ARMILTLFTGRILRRFHLELPSGTEVDMAGESGITLTPTPHML 553
            ||..|.:|...::::|..:.|...::.:.....:|::|..|.|
  Rat   454 ARSELFIFITSLIQKFTFKPPVNEKLSLQFRMSVTISPVSHRL 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phtmNP_573319.1 CYP306A1-like 81..553 CDD:410745 111/492 (23%)
Cyp2j3NP_786942.1 CYP2J 75..496 CDD:410755 112/493 (23%)

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