DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2j10

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001128452.2 Gene:Cyp2j10 / 313373 RGDID:1563215 Length:502 Species:Rattus norvegicus


Alignment Length:541 Identity:138/541 - (25%)
Similarity:239/541 - (44%) Gaps:72/541 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIFE 85
            ::||.....:.:..||..|:..:.    |||||.|||:|.|..||.:.||..:||..|:||.:..
  Rat    20 TLLLAAVTFLFLANYLKTRRPKNY----PPGPWRLPFVGNLFQLDVKQPHVVIQKFVKKYGNLTS 80

  Fly    86 LKMGRVPTVVLSDAALVRDFFRRDVMT--GRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDWL 148
            |..|.:|:||::...|:::.|......  .|....|...:....|:|.:....|:..||.|:..|
  Rat    81 LDFGTIPSVVITGLPLIKEAFTNTEQNFLNRPVTPLRKRVFNNNGLIMSNGQTWKEQRRFTMTTL 145

  Fly   149 KALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGIT 213
            |..|:.:|      .||:||....:..|.....:.    ....:|...::.::.|||..:.||..
  Rat   146 KNFGLGKR------SLEQRIQEEANYLVEAIGADK----GQPFDPHFKINSAVSNIICSITFGER 200

  Fly   214 YKRDDPDWLYLQRLQEEGVKLIG--VSGVVNFLPW-LRHLPANVRNIRFLLEGKAKTHAIYDRIV 275
            ::.:|..:..|.||.:|...|..  :..:.|..|. :::||.:.:.:                  
  Rat   201 FEYEDSLFQELLRLLDEASCLESSMMCQLYNVFPTIIKYLPGSHQTV------------------ 247

  Fly   276 EACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPECI 340
                .|..||.|:|        :...::..|    |:.:|          ||..|..|.:     
  Rat   248 ----LRNWEKLKLF--------ISCMMDSHQ----KDWNP----------DEPRDFIDAF----- 281

  Fly   341 LEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLH-ELLLPLG 404
            |......||..:..:..:.|.:...|||.||.:|:...|||.|||:......|.::| |:...:|
  Rat   282 LTEMAKYRDKTTTSFNKENLIYSTLDLFFAGSETTSNILRWSLLYITTNPEVQEKVHSEIDRVIG 346

  Fly   405 --PSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMD 467
              ..|:..:.:.:.|..|.|.|.:|:.:::||.:|.....:..:..:.:..|:.|:.:...:|.|
  Rat   347 HRRQPSTGDRDAMPYTNAVIHEVLRMGNIIPLNVPREMTADSTLAGFHLPKGTTILTNLTGLHRD 411

  Fly   468 PVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLELPS 532
            |..:..|:.|.||.|| .:|.::....|:|||.|.|.||||::||..|.:|...:::.|..:.|.
  Rat   412 PKEWATPDTFNPEHFL-ENGQFKKRDSFLPFSMGKRACPGEQLARTELFIFFTALMQNFTFKPPV 475

  Fly   533 GTEVDMAGESGITLTPTPHML 553
            ...:.:...:|:||.|..|.:
  Rat   476 NETLSLKFRNGLTLAPVSHRI 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 133/513 (26%)
Cyp2j10NP_001128452.2 cytochrome_P450 75..496 CDD:425388 116/480 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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